Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq103386 120 5e-22
seq83720 104 4e-17
>seq103386
Length=673
Score = 120 bits (132), Expect = 5e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639
|| ||||| ||||||||| || || || || ||||| | || |||||||||||||||
Sbjct 482 GTCGTGTTCGAGAACTCCAGCGTGACGTGTCCCTCCCAGCCCGGCTCCAGCGGCGTCACG 541
Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699
||||||||||| || || ||||||||||| || || | || | ||||| |||| |
Sbjct 542 TTGACGATGATCCCGCACCGCGCGTAGGTCGATTTGCCGAGGCAAATGACGAGCACGTCG 601
Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAA 35740
|| || | ||||| || |||||||| | |||||| |||||
Sbjct 602 CGAGGCACCCGGAAATACTCGACCGTCCTTGCCAGCGCGAA 642
>seq83720
Length=955
Score = 104 bits (114), Expect = 4e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287
|||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 545 GCCGGTTTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGTAGGTCGCGGGTTCGATT 604
Query 120288 CCTGATGCCGGCACCAT 120304
|||| ||||||||||
Sbjct 605 CCTGCAACCGGCACCAT 621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 824537632507560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |