Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022325.1 Length=69815 Score E Sequences producing significant alignments: (Bits) Value seq64155 118 5e-22 >seq64155 Length=1483 Score = 118 bits (130), Expect = 5e-22 Identities = 216/308 (70%), Gaps = 14/308 (5%) Strand=Plus/Minus Query 56067 ACCCGGTCGGGCTCGCCCAGCTCCAGCCGCTGATCGTTCTCGGTGATCTGCTGCACCAGC 56126 |||||||| | ||| ||| | | |||| || ||||||||| | ||||| ||| | | Sbjct 1182 ACCCGGTCCGTGTCGGTCAGATGCTGCCGGTGCTCGTTCTCGACCAACTGCTCCACGATC 1123 Query 56127 CGGGTCGCCGTG---TCCAGCTCAGCCGGGATCACATACACCGGCACCTCTGCCAGCTCA 56183 || |||||||| || || ||| | | || || ||||| | | || | | | Sbjct 1122 CGCCTCGCCGTGGAGTCGTCATCGGCCCGCACGAC-TAGACCGGGATCGTGGCGATCGCG 1064 Query 56184 GCCTCCCGCGCTGCGAGGGTGCGACGCTGGCCGGCACGGACATGCAGCACTCCGTCTTCG 56243 ||||| ||||||||||||||||| |||||||| ||||||||||||| | ||||| | Sbjct 1063 GCCTCGCGCGCTGCGAGGGTGCGGCGCTGGCCTGCACGGACATGCACCGTGCCGTCAGAG 1004 Query 56244 CCGCGC-ACCGCGGTGATCGGCACGATGACGCCGTTCTCCTTGATGCTGGCGACGAACT- 56301 ||||| | | ||| || ||| |||| |||||||| | || |||| | | ||||| Sbjct 1003 TCGCGCTATCCCGG-GA-CGGGACGAGGACGCCGTGCGTGCGGACGCTGTCCATGAACTC 946 Query 56302 -GCTTAGTCAGGCTC---GCCTCGGTGCGGACGTTGGCCTCCAGCACCAGCTCATTGGGG 56357 || | |||| || ||||| || |||||||||| ||| | |||||| | ||| Sbjct 945 GGCCT--CCAGGATCAGGGCCTCAGTCCGGACGTTGGTCTCGATCACCAGAGTGGTCGGG 888 Query 56358 TCGACGTG 56365 |||| ||| Sbjct 887 TCGAGGTG 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 222919669063504