Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022329.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq81249 143 9e-30 >seq81249 Length=1001 Score = 143 bits (158), Expect = 9e-30 Identities = 127/159 (80%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 41308 GTAGAGCCAGGCGATGGAGTCGCGGAGCTCAAACCCGGCGTCCTCGATCGCCGCCGCCAG 41367 ||||||||| ||||| |||||||||| ||| || |||||||||||||| | || || || Sbjct 1 GTAGAGCCACGCGATCGAGTCGCGGATCTCGAATCCGGCGTCCTCGATTCCGGCAGCGAG 60 Query 41368 CCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTACCCACCCGGCTTGAGGACCCG 41427 ||||| ||||||| | |||||||||||||| || | ||| || || ||||||| || Sbjct 61 GCGGTGGAAGGTGCGAGTACCGCCGAAGGCGAGGAGCTGCCCGCCGGGTTTGAGGATGCG 120 Query 41428 CAGACACTCGGCCGCCCACTCCTGGCTCCACTGTTGGAA 41466 || |||||||| ||||||| || || ||| || ||||| Sbjct 121 GAGGCACTCGGCGGCCCACTGCTCGCACCAGTGCTGGAA 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171241516077564