Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022330.1 Length=76586 Score E Sequences producing significant alignments: (Bits) Value seq86780 318 3e-82 seq62508 318 3e-82 seq109977 311 4e-80 seq94261 260 7e-65 seq114502 226 1e-54 seq81249 136 2e-27 seq109048 102 4e-17 >seq86780 Length=899 Score = 318 bits (352), Expect = 3e-82 Identities = 498/705 (71%), Gaps = 13/705 (2%) Strand=Plus/Minus Query 66197 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66256 || || ||||||||||| ||||| || || ||| | || || |||||||| | ||| Sbjct 882 GTCGAGATCTACGGCCCCGAATCGTCGGGCAAGACCACGCTCGCGCTCCACGCCATCGCC 823 Query 66257 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCC 66316 | |||||||||||||| |||| |||||| | | | || || ||||| | || || || Sbjct 822 GAGGCGCAGAAGGCCGGCGGCACCGCCGCGTTCGTGGATGCCGAGCATGCGCTCGATCCG 763 Query 66317 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGAC-AACCTCGTGGTGGTTCAGCCGGACAC 66375 | ||||||||| ||| || || || ||||| || ||| | || ||||| ||||| Sbjct 762 GTCTACGCCAAGAAGCTGGGCGTCAACATCGACGAAGCTCATCGTCAGCCAGCCCGACAC 703 Query 66376 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66435 ||||||||||| |||||||||| ||| || || ||| || | | | | | Sbjct 702 GGGCGAGCAGGCGCTGGAGATCGCGGACACGCTGGTGCGGTCGAACGCGTCGACGTGC-T 644 Query 66436 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 66495 || | || || || ||||| ||||||||||| || ||| |||| ||||| || || || Sbjct 643 GGTGATCGATTCGGTCGCGGCGCTGGTGCCGCGGGCGGAGATCGAGGGCGAGATGGGCGA 584 Query 66496 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCAC 66555 ||| || |||||||| || |||||||| ||| ||||| |||||||| |||| || | Sbjct 583 CAGCCATGTCGGCCTCCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGATCACGGGATC 524 Query 66556 CATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAA 66615 ||| | || |||| |||||| | ||| |||||||| | ||| ||||||||| Sbjct 523 GATCAGCCGCTCCAAGACGCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG--- 467 Query 66616 CGTGGGCTACGGC---CCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGC 66672 |||| |||||| ||| || || ||||||||||| || || | | ||||||||| Sbjct 466 CGTGATGTACGGCAATCCG---GACACGACCACGGGCGGCAACGCGCTCAAGTTCTACGC 410 Query 66673 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGATGAGGCTGTCG 66731 || |||||| | || |||| |||| || | || ||||| | || || |||| Sbjct 409 GTCCGTCCGCCTCGACATCCGCCGCA-CGGGCCAGATCAAGGATCGTGACGATATCGTCG 351 Query 66732 GCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCG 66791 ||||| || || ||||| ||||||||||||||| | || |||||| | | | || Sbjct 350 GCAACACGACGCGCGTGAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCG 291 Query 66792 AGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCG 66851 ||||| | || |||| || |||||| | || | || ||| ||||||| || | || Sbjct 290 AGTTCGACATCATGTATGGCGAGGGCGTGTCCAAGGTGGGCGAGATCCTCGATCTCGGCG 231 Query 66852 TGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66896 | | ||| ||||| |||| |||||||| ||||||| |||| Sbjct 230 TCAAGGCGGGGCTGGTCGAGAAATCGGGCGCGTGGTTCAGCTACG 186 >seq62508 Length=1551 Score = 318 bits (352), Expect = 3e-82 Identities = 526/753 (70%), Gaps = 17/753 (2%) Strand=Plus/Minus Query 66152 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66211 |||||| ||| |||||| |||| || ||| | ||||| ||| | || |||| || Sbjct 1319 CTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGTGTGATCGAGGTCTATGGT 1260 Query 66212 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66271 || || || || || ||| | || || || |||| | ||| | |||||||| | Sbjct 1259 CCCGAGTCGTCGGGCAAGACGACGCTCGCGCTGCACGTCATCGCCGAGTCGCAGAAGAAC 1200 Query 66272 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCG 66331 || |||| ||||||| | ||||||| |||||| | || ||||| | || |||||| Sbjct 1199 GGCGGCACTGCCGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGGTCTATGCCAAGAAA 1140 Query 66332 CTCGGT-GTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 66390 || || || || |||| | || | ||| ||||| ||||| ||||| ||||| || Sbjct 1139 CTTGGGCGTCAACATCGATGAGCTGATCGTGTCGCAGCCCGACACCGGCGAACAGGCGCT 1080 Query 66391 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 66450 ||||||||| ||| || ||| || || | | | | | || || || || || Sbjct 1079 GGAGATCGTCGACACGCTGGTCCGCTCCAACGCGATCGACGTGCTGGTGGTCGATTCGGT 1020 Query 66451 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 66510 || || |||||||||||||| ||| |||| ||||| || || ||||| ||||||||||| Sbjct 1019 CGCCGCGCTGGTGCCGCGCGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCT 960 Query 66511 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCAC--- 66567 || ||||| || ||||||||| | |||||||||| || ||| | ||| | || | Sbjct 959 TCAGGCGCGGCTGATGTCGCAGAGCTTGCGCAAGCTGACGGGCTCGATCAGCCGCTCGCG 900 Query 66568 CAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGG 66627 | || | ||| ||| |||||||| | ||| |||||||||| ||| ||||| Sbjct 899 CTGCATGGTGA---TCTTCATCAACCAGCTCCGCATGAAGATCGGC---GTGATGTACGG 846 Query 66628 C---CCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCAT 66684 | ||| ||||| ||||| ||||| || || ||| ||||||||||| || ||| | Sbjct 845 CAACCCG---GAGACGACCACCGGCGGCAACGCGCTGAAATTCTACGCCTCGGTTCGCCT 789 Query 66685 GGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCG 66744 || |||| |||| || | | ||||| |||| |||| ||||||||| ||||| Sbjct 788 CGACATCCGCCGCACCGGCGCGATCAAGGATCGCGACGAGGTCGTCGGCAACGCGACCCG 729 Query 66745 GGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGT 66804 ||||| || |||||||||||| | || |||||| | | | ||||||| | || | Sbjct 728 CGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCAT 669 Query 66805 GTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCC 66863 |||||| |||||| | || || | ||| |||||||||| | ||| | || | Sbjct 668 GTACGGCGAGGGCGTTCAGCAAGATCGGCGAGATCCTCGACCTCGGCGTCAAGGCCGGGC 609 Query 66864 TGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66896 |||| ||||||||||||| ||||||| |||| Sbjct 608 TGGTCGAGAAGTCGGGCGCGTGGTTCAGCTACG 576 >seq109977 Length=599 Score = 311 bits (344), Expect = 4e-80 Identities = 372/502 (74%), Gaps = 5/502 (1%) Strand=Plus/Minus Query 66432 TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCG 66491 |||||||| | ||||| || || ||||| ||||||||||||||| |||| ||||| || | Sbjct 581 TCGTCGTCATCGACTCCGTCGCAGCCCTCGTGCCGCGCGCCGAGATCGAGGGCGAGATGG 522 Query 66492 GGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTG 66551 | ||| |||||||||||| || || || |||||||||||||| | ||||||||||| | Sbjct 521 GTGACTCTCACGTCGGCCTCCAAGCTCGACTCATGTCGCAGGCGCTTCGCAAGCTCACCG 462 Query 66552 GCACCATCT-CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 66610 | || |||| ||| |||| || | ||| |||||||| |||||||||||||| Sbjct 461 GTGGTCTCAGCCAG-ACCCACACCACGATGATCTTCATCAACCAGCTGCGCGAGAAGATC 403 Query 66611 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTAC 66670 ||| ||| || |||| |||||||| ||||||| ||||| ||| ||||||| Sbjct 402 GGC---GTGTTCTTCGGCAGCCCCGAGACCACGGCGGGCGGCAAGGCGCTGAAGTTCTAC 346 Query 66671 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 66730 || || || ||| | || |||| ||||||| || |||||| ||| || || ||| Sbjct 345 GCGTCCGTGCGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGCACCGACGCGGTC 286 Query 66731 GGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 66790 |||||||||||||| || || ||||||||||||||| |||| ||||| | | ||| Sbjct 285 GGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTTCAAGCAGGCC 226 Query 66791 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 66850 |||||| | || | ||||| | |||||||| || |||| | || ||||| | | | Sbjct 225 GAGTTCGACATCCTCTACGGCGTCGGCATCTCCCGCGAGGGCAGCCTGATCGACTTCGGC 166 Query 66851 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTC 66910 || ||| ||| | || ||||||||||||||||||| || ||||| || | | | | Sbjct 165 GTCGAGCACGGCATCGTCAAGAAGTCGGGCGCCTGGTACACGTACGAGGGCGACCAGCTG 106 Query 66911 GCTCAGGGCAAGCCCAAGGCCG 66932 | ||||||||| ||||||| Sbjct 105 GGCCAGGGCAAGGAGAAGGCCG 84 >seq94261 Length=791 Score = 260 bits (288), Expect = 7e-65 Identities = 425/609 (70%), Gaps = 5/609 (1%) Strand=Plus/Plus Query 66283 CGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGA 66342 ||||| | | || || |||||| |||| || || |||||| |||||| || | Sbjct 6 CGCCTTCGTGGATGCCGAGCACGCCCTCGATCCGATCTACGCCCGCAAGCTCGGCGTCAA 65 Query 66343 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66402 |||||| |||| || | ||||| ||||| ||||||||||| ||||||||| || Sbjct 66 TCTCGACGACCTGCTGATCTCGCAGCCCGACACCGGCGAGCAGGCGCTGGAGATCACCGA 125 Query 66403 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 66462 | || || || |||| | | | | | || || || || |||||||| ||| Sbjct 126 CACGCTGGTGCGCTCCGGCGCGATCGACGTGCTGGTGGTCGATTCGGTGGCGGCGCTGAC 185 Query 66463 GCC-GCGCGCCGAGCTCGAAGGCGACATCGGGGAC-AGTCACGTCGGCCTGCACGCGCGC 66520 ||| ||| |||||| |||| ||||| || || ||| || || |||||| || || ||| Sbjct 186 GCCCGCGGGCCGAGATCGAGGGCGAGATGGGCGACGAGCCAGCCCGGCCTCCAGGCCCGC 245 Query 66521 CTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACG 66580 || ||| |||||| ||||||||||||| || | ||||| || | ||| || | Sbjct 246 CTGATGAGCCAGGCCCTGCGCAAGCTCACCGGTTCGATCTCGCGCTCGAACTGCATGGTG 305 Query 66581 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACC 66640 ||| |||||||| | || |||||||||| ||| |||||| || |||||| Sbjct 306 ATCTTCATCAACCAGATCCGGATGAAGATCGGC---GTGATGTACGGCTCGCCCGAGACC 362 Query 66641 ACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 66700 || || ||||| || || ||| |||||||||||| |||||| | || |||| |||||| Sbjct 363 ACGACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTCCGCCTCGACATCCGCCGCATC 422 Query 66701 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAG 66760 | ||| |||||| |||| ||||| ||||||||| ||| || || ||||| ||| Sbjct 423 TCGACCCTGAAGGACCGCGACGAGGCGATCGGCAACCAGGTCCGCGTCAAGGTCGTGAAG 482 Query 66761 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 66820 |||||| | || |||||| | | | ||||||| | || ||| ||| |||||| | Sbjct 483 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCATGTTCGGCGAGGGCGTG 542 Query 66821 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 66880 ||| | | ||| || ||||||| | ||| | ||| | || ||||||| ||| Sbjct 543 TCGAAGGTCGGCGAGCTGATCGACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGC 602 Query 66881 GCCTGGTTC 66889 ||||||||| Sbjct 603 GCCTGGTTC 611 >seq114502 Length=552 Score = 226 bits (250), Expect = 1e-54 Identities = 391/561 (70%), Gaps = 24/561 (4%) Strand=Plus/Plus Query 66125 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 66184 || || || || |||| || | | | ||||| || ||||||||||| || | ||| Sbjct 1 GAGGTGATCCCGTCCGGGTCCCTGGGTTTGGACCTGGCGCTGGGCATCGGCGGCTTGCCG 60 Query 66185 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 66244 ||||||| | | || |||||||| || ||| || || ||| | || || ||| Sbjct 61 CGGGGCCGCATCATCGAGATCTACGGGCCGGAAAGCTCCGGCAAGACCACGTTGGCGCTC 120 Query 66245 CACGCGGTGGCCAATGCGCAGAAGGCC--GGTGGCAACGCCGCCTACATCGACGCTGAGC 66302 |||||| | ||| | |||||| ||| || |||| | |||| |||||| || |||| Sbjct 121 CACGCGATTGCCGAAGCGCAG--CGCCGGGGCGGCACCTGTGCCTTCATCGATGCGGAGC 178 Query 66303 ACTCCCTGGACCCCGAGTACGC---CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGG 66359 || | |||||||| ||||| ||| ||| || |||||| | ||||||||| || Sbjct 179 ACGCGCTGGACCCGATCTACGCGCGCAA---GCTGGGCGTGGACGTGGACAACCTCCTGC 235 Query 66360 TGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 66419 || ||||||||| ||| |||||||| |||||||||| ||| || || || | Sbjct 236 TGAGCCAGCCGGACGGTGGTGAGCAGGCGCTGGAGATCGCAGACACGCTGGTTCGCTCGG 295 Query 66420 GCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66479 ||| | | | | || || ||| || ||||| ||||||||||| || || || | Sbjct 296 GCGCCATCGACGTGCTGGTGGTGGACAGCGTCGCGGCGCTGGTGCCGCGGGCGGAACTGG 355 Query 66480 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGC 66539 ||||||| || || ||||| |||||||||||||| || || |||||| |||||| ||| Sbjct 356 AAGGCGAGATGGGCGACAGCCACGTCGGCCTGCATGCCCGGCTCATGAGCCAGGCCCTGC 415 Query 66540 GCAAGCTCACTGGCACCATCTCCAGCAC---CAACACGCTGACGCTCTGGGTCAACCAGT 66596 ||||||| || |||| | | | | | || || ||| | ||| |||||||| Sbjct 416 GCAAGCTGACGGGCAGCGTGGCGCGGTCGCGCACCATGCTCA---TCTTCCTCAACCAGA 472 Query 66597 TGCGCGAGAAGATCGGC--AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAA 66654 | || |||||||||| | || ||| || |||||| |||||||||||||| || Sbjct 473 TCCGGTTGAAGATCGGCGTGATGTCGGCAAC--CCCGAA----ACCACCACGGGCGGCAA 526 Query 66655 GGCTTTGAGGTTCTACGCCTC 66675 || ||| ||||||||| || Sbjct 527 CGCGCTGAAGTTCTACGCGTC 547 >seq81249 Length=1001 Score = 136 bits (150), Expect = 2e-27 Identities = 207/288 (72%), Gaps = 14/288 (5%) Strand=Plus/Minus Query 59357 TCCACCTCGGCGACTGCCGGGACATCCTCGCCGAACTTGAA-GACGCCAGCGTCGACTCC 59415 || ||||||||||||||| ||| ||||| | ||| || |||| |||||| || || Sbjct 287 TCTACCTCGGCGACTGCCTCGACGTCCTC-CGGAAGCTGCCCGACGGCAGCGTGCACGCC 229 Query 59416 ATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGACGGCT---CA 59472 |||||||||| |||||||||| || | ||||||||| | ||||| ||| | Sbjct 228 GTCGTCACCGATCCGCCCTACGCCCTCGACTTCATGGGCCACGGCTGGGATCGCTACACC 169 Query 59473 GGCATCGCTTTCGAT-----GT-CGAGATGTGGGA-GC--AATGCCTGCGGGTCCTCAAG 59523 | || ||| | || |||| ||||| || | ||||| || ||||||| Sbjct 168 CCCGGCGAGTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAA 109 Query 59524 CCCGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTGACCGTGGCC 59583 ||||| ||||| || |||||||||||||| | ||||||| ||||| || | | | Sbjct 108 CCCGGCGGGCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGA 49 Query 59584 ATCGAGGACGCGGGCTTCGAGATTCGTGACTCCATCGCCTGGCTGTAC 59631 ||||||||||| || |||||||| || ||||| ||||| ||||| ||| Sbjct 48 ATCGAGGACGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 >seq109048 Length=609 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60794 CTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAG 60853 |||||||||||||| ||||||||| |||||||| |||||||||||||||||| | || Sbjct 602 CTCAAGCAGCGCTCGTTCGAGACCCGTGAGGGCGAGAAGCGCACCGTCATCGAGCTCGAC 543 Query 60854 GTAGACGAGATCGGCCCGTCGCTG 60877 || || ||| |||||||||||||| Sbjct 542 GTCGAGGAGGTCGGCCCGTCGCTG 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244551592349863