Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022966.1 Length=88135 Score E Sequences producing significant alignments: (Bits) Value seq85399 87.8 1e-12 >seq85399 Length=924 Score = 87.8 bits (96), Expect = 1e-12 Identities = 88/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 44274 CGTACTGCGGTGTGCTGCCTGTCGAGTGTTAACCTGGGTACCTACGATGAGTGGAAGGAC 44333 || || |||||||||||||||||||| | ||||| | |||| || |||||||||||| Sbjct 429 CGCACCGCGGTGTGCTGCCTGTCGAGCCTCAACCTCGAGACCTGGGACGAGTGGAAGGAC 488 Query 44334 GACCCGCTG-TTTATCGCGGACATGGTTCGATTCCTGGACAACGTGCTGGAG 44384 | | ||| | || ||| |||| || | || ||||| |||||||||||| || Sbjct 489 G-CGCGCGGCTTCGTCGAGGACGTGATGCGCTTCCTCGACAACGTGCTGCAG 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281448222394784