Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_022972.2
Length=37372
Score E
Sequences producing significant alignments: (Bits) Value
seq88096 102 2e-17
>seq88096
Length=879
Score = 102 bits (112), Expect = 2e-17
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 33119 CCATGACGTCGTGGCCGAACAGTCCGTGCTCGGGGCCATGCTCATCAGCAGGGAAGCCAT 33178
||| ||| | | ||||| ||| ||| ||||| || ||||| ||||| ||| || ||
Sbjct 822 CCAGGACATGGACGCCGAGCAGAGCGTCCTCGGCGCGATGCTGTCCAGCAAGGACGCGAT 763
Query 33179 CCCGGATATCGCGGACATCCTCGACGGCGGAGACTTCTACCGGCCCGCACACGAGACCAT 33238
| | || ||| || || | ||||| ||||||||||| ||||| |||||| | |
Sbjct 762 CGCCGACGTCGTCGAGGTCGTGCGCGGCGTCGACTTCTACCGCCCCGCCCACGAGCTCGT 703
Query 33239 CTACCGGACCATCCTCGACGTCCACG-CTGCGGGCAACCCCGTCGACGCCATCACCATCA 33297
|||| || |||||||| || ||| | |||| | |||||| ||||||| |||| |
Sbjct 702 CTACGACGCCGTCCTCGACCTCTACGGCCGCGG-CGACCCCGCCGACGCCGTCACGGTGG 644
Query 33298 ACGACGCGCTATCCAAGATGGGCGAAATCCAGCGCGTCGGCGG 33340
||||| ||| ||||| ||| | ||| |||||||||||
Sbjct 643 CCGACGAGCTGACCAAGCGCGGCCAGATCGCCCGCGTCGGCGG 601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119279278354412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |