Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022972.2 Length=37372 Score E Sequences producing significant alignments: (Bits) Value seq88096 102 2e-17 >seq88096 Length=879 Score = 102 bits (112), Expect = 2e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 33119 CCATGACGTCGTGGCCGAACAGTCCGTGCTCGGGGCCATGCTCATCAGCAGGGAAGCCAT 33178 ||| ||| | | ||||| ||| ||| ||||| || ||||| ||||| ||| || || Sbjct 822 CCAGGACATGGACGCCGAGCAGAGCGTCCTCGGCGCGATGCTGTCCAGCAAGGACGCGAT 763 Query 33179 CCCGGATATCGCGGACATCCTCGACGGCGGAGACTTCTACCGGCCCGCACACGAGACCAT 33238 | | || ||| || || | ||||| ||||||||||| ||||| |||||| | | Sbjct 762 CGCCGACGTCGTCGAGGTCGTGCGCGGCGTCGACTTCTACCGCCCCGCCCACGAGCTCGT 703 Query 33239 CTACCGGACCATCCTCGACGTCCACG-CTGCGGGCAACCCCGTCGACGCCATCACCATCA 33297 |||| || |||||||| || ||| | |||| | |||||| ||||||| |||| | Sbjct 702 CTACGACGCCGTCCTCGACCTCTACGGCCGCGG-CGACCCCGCCGACGCCGTCACGGTGG 644 Query 33298 ACGACGCGCTATCCAAGATGGGCGAAATCCAGCGCGTCGGCGG 33340 ||||| ||| ||||| ||| | ||| ||||||||||| Sbjct 643 CCGACGAGCTGACCAAGCGCGGCCAGATCGCCCGCGTCGGCGG 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119279278354412