Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022973.1 Length=50755 Score E Sequences producing significant alignments: (Bits) Value seq103996 80.6 9e-11 seq37623 80.6 9e-11 >seq103996 Length=666 Score = 80.6 bits (88), Expect = 9e-11 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 4138 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCT 4194 || ||||||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct 456 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCT 400 >seq37623 Length=2350 Score = 80.6 bits (88), Expect = 9e-11 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 4138 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCT 4194 || ||||||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct 1361 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCT 1305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162036941134106