Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022981.1 Length=76323 Score E Sequences producing significant alignments: (Bits) Value seq109977 329 2e-85 seq86780 327 6e-85 seq62508 327 6e-85 seq94261 273 1e-68 seq114502 232 3e-56 seq109048 102 4e-17 >seq109977 Length=599 Score = 329 bits (364), Expect = 2e-85 Identities = 376/502 (75%), Gaps = 5/502 (1%) Strand=Plus/Minus Query 66645 TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCG 66704 |||||||| | ||||| || || ||||| ||||||||||||||| |||| ||||| || | Sbjct 581 TCGTCGTCATCGACTCCGTCGCAGCCCTCGTGCCGCGCGCCGAGATCGAGGGCGAGATGG 522 Query 66705 GGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCG 66764 | ||| |||||||||||| || || || |||||||||||||| | ||||||||||||| Sbjct 521 GTGACTCTCACGTCGGCCTCCAAGCTCGACTCATGTCGCAGGCGCTTCGCAAGCTCACCG 462 Query 66765 GCACCATCT-CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 66823 | || |||| ||| |||| || | ||| |||||||| |||||||||||||| Sbjct 461 GTGGTCTCAGCCAG-ACCCACACCACGATGATCTTCATCAACCAGCTGCGCGAGAAGATC 403 Query 66824 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 66883 ||| ||| || |||| |||||||| ||||||||||||| ||| ||||||| Sbjct 402 GGC---GTGTTCTTCGGCAGCCCCGAGACCACGGCGGGCGGCAAGGCGCTGAAGTTCTAC 346 Query 66884 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 66943 || || || ||| | || |||| ||||||| || |||||| ||| || || ||| Sbjct 345 GCGTCCGTGCGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGCACCGACGCGGTC 286 Query 66944 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 67003 |||||||||||||| || |||||||||||||||||| |||| ||||| | | ||| Sbjct 285 GGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTTCAAGCAGGCC 226 Query 67004 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 67063 |||||| | || | ||||| | |||||||| || |||| | || ||||| | | | Sbjct 225 GAGTTCGACATCCTCTACGGCGTCGGCATCTCCCGCGAGGGCAGCCTGATCGACTTCGGC 166 Query 67064 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTC 67123 || ||| ||| | || ||||||||||||||||||| || ||||| || | | | | Sbjct 165 GTCGAGCACGGCATCGTCAAGAAGTCGGGCGCCTGGTACACGTACGAGGGCGACCAGCTG 106 Query 67124 GCCCAGGGCAAGCCCAAGGCCG 67145 | |||||||||| ||||||| Sbjct 105 GGCCAGGGCAAGGAGAAGGCCG 84 >seq86780 Length=899 Score = 327 bits (362), Expect = 6e-85 Identities = 500/705 (71%), Gaps = 13/705 (2%) Strand=Plus/Minus Query 66410 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66469 || || ||||||||||| ||||| || || ||| | || || |||||||| | ||| Sbjct 882 GTCGAGATCTACGGCCCCGAATCGTCGGGCAAGACCACGCTCGCGCTCCACGCCATCGCC 823 Query 66470 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 66529 | |||||||||||||| |||| |||||| | | | || || ||||| | || || || Sbjct 822 GAGGCGCAGAAGGCCGGCGGCACCGCCGCGTTCGTGGATGCCGAGCATGCGCTCGATCCG 763 Query 66530 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGAC-AACCTCGTGGTGGTTCAGCCGGACAC 66588 | ||||||||| ||| || || || ||||| || ||| | || ||||| ||||| Sbjct 762 GTCTACGCCAAGAAGCTGGGCGTCAACATCGACGAAGCTCATCGTCAGCCAGCCCGACAC 703 Query 66589 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66648 ||||||||||| |||||||||| ||| || || ||| || | | | | | Sbjct 702 GGGCGAGCAGGCGCTGGAGATCGCGGACACGCTGGTGCGGTCGAACGCGTCGACGTGC-T 644 Query 66649 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 66708 || | || || || ||||| ||||||||||| || ||| |||| ||||| || || || Sbjct 643 GGTGATCGATTCGGTCGCGGCGCTGGTGCCGCGGGCGGAGATCGAGGGCGAGATGGGCGA 584 Query 66709 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 66768 ||| || |||||||| || |||||||| ||| ||||| |||||||| |||| || | Sbjct 583 CAGCCATGTCGGCCTCCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGATCACGGGATC 524 Query 66769 CATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAA 66828 ||| | || |||| |||||| | ||| |||||||| | ||| ||||||||| Sbjct 523 GATCAGCCGCTCCAAGACGCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG--- 467 Query 66829 CGTGGGCTACGGC---CCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGC 66885 |||| |||||| ||| || || |||||||||||||| || | | ||||||||| Sbjct 466 CGTGATGTACGGCAATCCG---GACACGACCACGGGCGGCAACGCGCTCAAGTTCTACGC 410 Query 66886 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGATGAGGCTGTCG 66944 || |||||| | || |||| |||| || | || ||||| | || || |||| Sbjct 409 GTCCGTCCGCCTCGACATCCGCCGCA-CGGGCCAGATCAAGGATCGTGACGATATCGTCG 351 Query 66945 GCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCG 67004 ||||| || || ||||||||||||||||||||| | || |||||| | | | || Sbjct 350 GCAACACGACGCGCGTGAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCG 291 Query 67005 AGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCG 67064 ||||| | || |||| || |||||| | || | || ||| ||||||| || | || Sbjct 290 AGTTCGACATCATGTATGGCGAGGGCGTGTCCAAGGTGGGCGAGATCCTCGATCTCGGCG 231 Query 67065 TGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 67109 | | ||| ||||| |||| |||||||| ||||||| |||| Sbjct 230 TCAAGGCGGGGCTGGTCGAGAAATCGGGCGCGTGGTTCAGCTACG 186 >seq62508 Length=1551 Score = 327 bits (362), Expect = 6e-85 Identities = 528/753 (70%), Gaps = 17/753 (2%) Strand=Plus/Minus Query 66365 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66424 |||||| ||| |||||| |||| || ||| | ||||| ||| | || |||| || Sbjct 1319 CTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGTGTGATCGAGGTCTATGGT 1260 Query 66425 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66484 || || || || || ||| | || || || |||| | ||| | |||||||| | Sbjct 1259 CCCGAGTCGTCGGGCAAGACGACGCTCGCGCTGCACGTCATCGCCGAGTCGCAGAAGAAC 1200 Query 66485 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66544 || |||| ||||||| | ||||||| |||||| | || ||||| | || |||||| Sbjct 1199 GGCGGCACTGCCGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGGTCTATGCCAAGAAA 1140 Query 66545 CTCGGT-GTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 66603 || || || || |||| | || | ||| ||||| ||||| ||||| ||||| || Sbjct 1139 CTTGGGCGTCAACATCGATGAGCTGATCGTGTCGCAGCCCGACACCGGCGAACAGGCGCT 1080 Query 66604 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 66663 ||||||||| ||| || ||| || || | | | | | || || || || || Sbjct 1079 GGAGATCGTCGACACGCTGGTCCGCTCCAACGCGATCGACGTGCTGGTGGTCGATTCGGT 1020 Query 66664 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 66723 || || |||||||||||||| ||| |||| ||||| || || ||||| ||||||||||| Sbjct 1019 CGCCGCGCTGGTGCCGCGCGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCT 960 Query 66724 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCAC--- 66780 || ||||| || ||||||||| | |||||||||| || ||| | ||| | || | Sbjct 959 TCAGGCGCGGCTGATGTCGCAGAGCTTGCGCAAGCTGACGGGCTCGATCAGCCGCTCGCG 900 Query 66781 CAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGG 66840 | || | ||| ||| |||||||| | ||| |||||||||| ||| ||||| Sbjct 899 CTGCATGGTGA---TCTTCATCAACCAGCTCCGCATGAAGATCGGC---GTGATGTACGG 846 Query 66841 C---CCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCAT 66897 | ||| ||||| ||||| |||||||| || ||| ||||||||||| || ||| | Sbjct 845 CAACCCG---GAGACGACCACCGGCGGCAACGCGCTGAAATTCTACGCCTCGGTTCGCCT 789 Query 66898 GGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCG 66957 || |||| |||| || | | ||||| |||| |||| ||||||||| ||||| Sbjct 788 CGACATCCGCCGCACCGGCGCGATCAAGGATCGCGACGAGGTCGTCGGCAACGCGACCCG 729 Query 66958 GGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGT 67017 |||||||| |||||||||||| | || |||||| | | | ||||||| | || | Sbjct 728 CGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCAT 669 Query 67018 GTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCC 67076 |||||| |||||| | || || | ||| |||||||||| | ||| | || | Sbjct 668 GTACGGCGAGGGCGTTCAGCAAGATCGGCGAGATCCTCGACCTCGGCGTCAAGGCCGGGC 609 Query 67077 TGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 67109 |||| ||||||||||||| ||||||| |||| Sbjct 608 TGGTCGAGAAGTCGGGCGCGTGGTTCAGCTACG 576 >seq94261 Length=791 Score = 273 bits (302), Expect = 1e-68 Identities = 428/609 (70%), Gaps = 5/609 (1%) Strand=Plus/Plus Query 66496 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 66555 ||||| | | || || |||||| |||| || || |||||| |||||| || | Sbjct 6 CGCCTTCGTGGATGCCGAGCACGCCCTCGATCCGATCTACGCCCGCAAGCTCGGCGTCAA 65 Query 66556 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66615 |||||| |||| || | ||||| ||||| ||||||||||| ||||||||| || Sbjct 66 TCTCGACGACCTGCTGATCTCGCAGCCCGACACCGGCGAGCAGGCGCTGGAGATCACCGA 125 Query 66616 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 66675 | || || || |||| | | | | | || || || || |||||||| ||| Sbjct 126 CACGCTGGTGCGCTCCGGCGCGATCGACGTGCTGGTGGTCGATTCGGTGGCGGCGCTGAC 185 Query 66676 GCC-GCGCGCCGAGCTCGAAGGCGACATCGGGGAC-AGTCACGTCGGCCTGCACGCGCGC 66733 ||| ||| |||||| |||| ||||| || || ||| || || |||||| || || ||| Sbjct 186 GCCCGCGGGCCGAGATCGAGGGCGAGATGGGCGACGAGCCAGCCCGGCCTCCAGGCCCGC 245 Query 66734 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACG 66793 || ||| |||||| |||||||||||||||| | ||||| || | ||| || | Sbjct 246 CTGATGAGCCAGGCCCTGCGCAAGCTCACCGGTTCGATCTCGCGCTCGAACTGCATGGTG 305 Query 66794 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACC 66853 ||| |||||||| | || |||||||||| ||| |||||| || |||||| Sbjct 306 ATCTTCATCAACCAGATCCGGATGAAGATCGGC---GTGATGTACGGCTCGCCCGAGACC 362 Query 66854 ACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 66913 || || |||||||| || ||| |||||||||||| |||||| | || |||| |||||| Sbjct 363 ACGACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTCCGCCTCGACATCCGCCGCATC 422 Query 66914 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAG 66973 | ||| |||||| |||| ||||| ||||||||| ||| || |||||||| ||| Sbjct 423 TCGACCCTGAAGGACCGCGACGAGGCGATCGGCAACCAGGTCCGCGTCAAGGTCGTGAAG 482 Query 66974 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 67033 |||||| | || |||||| | | | ||||||| | || ||| ||| |||||| | Sbjct 483 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCATGTTCGGCGAGGGCGTG 542 Query 67034 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 67093 ||| | | ||| || ||||||| | ||| | ||| | || ||||||| ||| Sbjct 543 TCGAAGGTCGGCGAGCTGATCGACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGC 602 Query 67094 GCCTGGTTC 67102 ||||||||| Sbjct 603 GCCTGGTTC 611 >seq114502 Length=552 Score = 232 bits (256), Expect = 3e-56 Identities = 392/561 (70%), Gaps = 24/561 (4%) Strand=Plus/Plus Query 66338 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 66397 || || || || |||| || | | | ||||| || ||||||||||| || | ||| Sbjct 1 GAGGTGATCCCGTCCGGGTCCCTGGGTTTGGACCTGGCGCTGGGCATCGGCGGCTTGCCG 60 Query 66398 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 66457 ||||||| | | || |||||||| || ||| || || ||| | || || ||| Sbjct 61 CGGGGCCGCATCATCGAGATCTACGGGCCGGAAAGCTCCGGCAAGACCACGTTGGCGCTC 120 Query 66458 CACGCGGTGGCCAATGCGCAGAAGGCC--GGTGGCAACGCCGCCTACATCGACGCTGAGC 66515 |||||| | ||| | |||||| ||| || |||| | |||| |||||| || |||| Sbjct 121 CACGCGATTGCCGAAGCGCAG--CGCCGGGGCGGCACCTGTGCCTTCATCGATGCGGAGC 178 Query 66516 ACTCCCTGGACCCTGAGTACGC---CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGG 66572 || | |||||||| ||||| ||| ||| || |||||| | ||||||||| || Sbjct 179 ACGCGCTGGACCCGATCTACGCGCGCAA---GCTGGGCGTGGACGTGGACAACCTCCTGC 235 Query 66573 TGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 66632 || ||||||||| ||| |||||||| |||||||||| ||| || || || | Sbjct 236 TGAGCCAGCCGGACGGTGGTGAGCAGGCGCTGGAGATCGCAGACACGCTGGTTCGCTCGG 295 Query 66633 GCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66692 ||| | | | | || || ||| || ||||| ||||||||||| || || || | Sbjct 296 GCGCCATCGACGTGCTGGTGGTGGACAGCGTCGCGGCGCTGGTGCCGCGGGCGGAACTGG 355 Query 66693 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGC 66752 ||||||| || || ||||| |||||||||||||| || || |||||| |||||| ||| Sbjct 356 AAGGCGAGATGGGCGACAGCCACGTCGGCCTGCATGCCCGGCTCATGAGCCAGGCCCTGC 415 Query 66753 GCAAGCTCACCGGCACCATCTCCAGCAC---CAACACGCTGACGCTCTGGGTCAACCAGT 66809 ||||||| || |||| | | | | | || || ||| | ||| |||||||| Sbjct 416 GCAAGCTGACGGGCAGCGTGGCGCGGTCGCGCACCATGCTCA---TCTTCCTCAACCAGA 472 Query 66810 TGCGCGAGAAGATCGGC--AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAA 66867 | || |||||||||| | || ||| || |||||| ||||||||||||||||| Sbjct 473 TCCGGTTGAAGATCGGCGTGATGTCGGCAAC--CCCGAA----ACCACCACGGGCGGCAA 526 Query 66868 GGCTTTGAGGTTCTACGCCTC 66888 || ||| ||||||||| || Sbjct 527 CGCGCTGAAGTTCTACGCGTC 547 >seq109048 Length=609 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60809 CTCAAGCAGCGCTCCTTCGAGACCAGGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAG 60868 |||||||||||||| ||||||||| | || ||||| |||||||||||||||||| | || Sbjct 602 CTCAAGCAGCGCTCGTTCGAGACCCGTGAGGGCGAGAAGCGCACCGTCATCGAGCTCGAC 543 Query 60869 GTAGACGAGATCGGCCCGTCGCTG 60892 || || ||| |||||||||||||| Sbjct 542 GTCGAGGAGGTCGGCCCGTCGCTG 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243711362572236