Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_023552.1 Length=47162 Score E Sequences producing significant alignments: (Bits) Value seq81249 145 2e-30 >seq81249 Length=1001 Score = 145 bits (160), Expect = 2e-30 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 38223 GTTTCAGCAGTGGTGCGCGCAGTGGGCGGCTGAGTGCTTGCGTGTGTTGAAACCGGGCGG 38282 ||| ||||| ||||||| ||||||||| || |||||| | || | | ||||| ||||| Sbjct 160 GTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAACCCGGCGG 101 Query 38283 GCACATGTTGGCGTTCGGCGGTTCGCGCACCTGGCACCGGCTGGCGGCGGCGATCGAGGA 38342 ||| | | || ||||||||| | ||||||| ||||| || || || | |||||||| Sbjct 100 GCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGAATCGAGGA 41 Query 38343 CGCCGGGTTCGAGGTCCGCGACTCGATCGCGTGGCTGTAC 38382 |||||| |||||| |||||||||||||||||||||| ||| Sbjct 40 CGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150557580574632