Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq10933 89.7 7e-13
seq12261 84.2 3e-11
>seq10933
Length=18736
Score = 89.7 bits (98), Expect = 7e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 51967 TGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTAC 52026
|||||||| || | || | |||| ||||||||||||||||| |||||||||||| | |
Sbjct 15112 TGAATTTGTCTGTTACCTCACCATACAATGCTGATTTTGATGGTGATGAAATGAATATGC 15053
Query 52027 ATGTTCCTCAATCATATGGAGCTA 52050
||||||||||||||| || | |||
Sbjct 15052 ATGTTCCTCAATCATTTGAAACTA 15029
>seq12261
Length=16166
Score = 84.2 bits (92), Expect = 3e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 51967 TGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTAC 52026
|||||||| || | || | |||| ||||||||||||||||| ||||||||||| | |
Sbjct 2679 TGAATTTGTCTGTTACCTCACCATACAATGCTGATTTTGATGGTGATGAAATGAACATGC 2620
Query 52027 ATGTTCCTCAATCATATGGAGCTA 52050
||||||||||||||| || | |||
Sbjct 2619 ATGTTCCTCAATCATTTGAAACTA 2596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634116940744920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |