Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_023697.1
Length=48420
Score E
Sequences producing significant alignments: (Bits) Value
seq97958 91.5 5e-14
seq79087 89.7 2e-13
seq95122 82.4 2e-11
seq83344 82.4 2e-11
>seq97958
Length=744
Score = 91.5 bits (100), Expect = 5e-14
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 13721 TGGAACGCGATTGCGCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGC 13780
|||||| ||| |||| |||| || || ||||||||| | |||||||| |||||||
Sbjct 76 TGGAACCGGATCGCGCGCTGCGAGTCCGGGGGCAACTGGAAGATCAACACGCACAACGGC 135
Query 13781 TACTACGGCGGTCTGCAGTTCAAGCAGTCGAGCTGGGAGGCTGCGGGCGGCACCAACTAC 13840
||||||||||| ||||||||||| | | | |||| || | || |||||| ||| | |
Sbjct 136 TACTACGGCGGCCTGCAGTTCAACCTCGCCACCTGGAAGTCGGCCGGCGGCCGCAAGTTC 195
Query 13841 GCG 13843
|||
Sbjct 196 GCG 198
>seq79087
Length=1043
Score = 89.7 bits (98), Expect = 2e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 13740 GCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGCTACTACGGCGGTCTGCAGT 13799
|||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 754 GCGAGTCCGGCGGCAACTGGTCGATCAACACCGGCAACGGCTACTACGGCGGGCTGCAGT 695
Query 13800 TCAAGCAGTCGAGCTGG 13816
|||| | | || ||||
Sbjct 694 TCAACCTGCAGACCTGG 678
>seq95122
Length=780
Score = 82.4 bits (90), Expect = 2e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 13740 GCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGCTACTACGGCGGTCTGCAGT 13799
|||| || |||||||||||| |||| ||||||||||||| ||||||||||| |||||||
Sbjct 344 GCGAGTCGGGCGGCAACTGGAGCATCGACACCGGCAACGGGTACTACGGCGGGCTGCAGT 403
Query 13800 TCA 13802
|||
Sbjct 404 TCA 406
>seq83344
Length=962
Score = 82.4 bits (90), Expect = 2e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 35478 GCAGCTGCGCCACGCGATCGAGCTAGTGGTGACGAGCCAGTTCGCCTCGGCGTCGATGCT 35537
|| ||||| | ||| |||||| || || |||| |||||||| |||| | ||||||||
Sbjct 316 GCTGCTGCTCGCGGCGGTCGAGCAGGTCGTCACGACCCAGTTCGGCTCGACCTCGATGCT 375
Query 35538 GCAACGCAAGCTCGACGTCGGGTTCGCCCGTGCGCAACGCCTGCTCGACGAAATGGAACA 35597
||| ||||||||| |||||||||||| || || ||| | ||| |||||
Sbjct 376 GCAGCGCAAGCTCCGCGTCGGGTTCGCGAAGGCCGGCCGGCTGATGGACCTGATGGAGTC 435
Query 35598 GCTCGGCATCGTCGGCGAGGCGCAGGGCAGCAAGGCACGCGCGGTCTACTTCGCCGCCGA 35657
|| ||||| ||| | | ||||| ||||| |||| || | || | |||||
Sbjct 436 GCGGAAGATCGTGGGCCCGTCCGAGGGCTCGAAGGCGCGCGACGTGCTCGTCTCGGCCGA 495
Query 35658 CGACCTGGCCGGAGCGCTCGCGC 35680
| | || |||| |||||||||
Sbjct 496 CCAGCTCGCCGACACGCTCGCGC 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154576794486076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |