Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_023712.1 Length=71341 Score E Sequences producing significant alignments: (Bits) Value seq64155 113 2e-20 >seq64155 Length=1483 Score = 113 bits (124), Expect = 2e-20 Identities = 215/308 (70%), Gaps = 14/308 (5%) Strand=Plus/Minus Query 57705 ACCCGGTCGGGCTCGCCCAGCTCCAGCCGCTGATCGTTCTCGGTGATCTGCTGCACCAGC 57764 |||||||| | ||| ||| | | |||| || ||||||||| | ||||| ||| | | Sbjct 1182 ACCCGGTCCGTGTCGGTCAGATGCTGCCGGTGCTCGTTCTCGACCAACTGCTCCACGATC 1123 Query 57765 CGGGTCGCCGTG---TCCAGCTCAGCCGGGATCACATACACCGGCACCTCTGCCAGCTCA 57821 || |||||||| || || ||| | | || || ||||| | | || | | | Sbjct 1122 CGCCTCGCCGTGGAGTCGTCATCGGCCCGCACGAC-TAGACCGGGATCGTGGCGATCGCG 1064 Query 57822 GCCTCCCGCGCTGCGAGGGTGCGACGCTGGCCGGCACGGACATGCAGCACTCCGTCCTCG 57881 ||||| ||||||||||||||||| |||||||| ||||||||||||| | ||||| | Sbjct 1063 GCCTCGCGCGCTGCGAGGGTGCGGCGCTGGCCTGCACGGACATGCACCGTGCCGTCAGAG 1004 Query 57882 CCGCGC-ACCGCGGTGATCGGCACGATGACACCGTTCTCCTTGATGCTGGCGACGAACT- 57939 ||||| | | ||| || ||| |||| ||| |||| | || |||| | | ||||| Sbjct 1003 TCGCGCTATCCCGG-GA-CGGGACGAGGACGCCGTGCGTGCGGACGCTGTCCATGAACTC 946 Query 57940 -GCTTGGTCAGGCTC---GCCTCGGTGCGGACGTTGGCCTCCAGCACCAGCTCATTGGGG 57995 || | |||| || ||||| || |||||||||| ||| | |||||| | ||| Sbjct 945 GGCCT--CCAGGATCAGGGCCTCAGTCCGGACGTTGGTCTCGATCACCAGAGTGGTCGGG 888 Query 57996 TCGACGTG 58003 |||| ||| Sbjct 887 TCGAGGTG 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227794918647758