Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_023731.1
Length=53526
Score E
Sequences producing significant alignments: (Bits) Value
seq103996 82.4 3e-11
seq37623 82.4 3e-11
seq105772 80.6 9e-11
>seq103996
Length=666
Score = 82.4 bits (90), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 6015 GTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGAGTCCTG 6072
|| ||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||
Sbjct 456 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 399
>seq37623
Length=2350
Score = 82.4 bits (90), Expect = 3e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 6015 GTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGAGTCCTG 6072
|| ||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||
Sbjct 1361 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 1304
>seq105772
Length=647
Score = 80.6 bits (88), Expect = 9e-11
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 6015 GTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGAGTCCTGGC 6074
|| ||||||| ||||||||||||||||||||| |||| |||| ||||||| ||||||| |
Sbjct 556 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTGTC 497
Query 6075 AGGCCCGCA 6083
| || |||
Sbjct 496 CGCCCTGCA 488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170890074479584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |