Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_023735.1 Length=76797 Score E Sequences producing significant alignments: (Bits) Value seq59665 104 1e-17 >seq59665 Length=1686 Score = 104 bits (114), Expect = 1e-17 Identities = 177/256 (69%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 63895 GGCCTGATGAACTTCCTCATGTCCGGACGACATGGCTCTCCGTTCGAGCACGGTCTGATG 63954 |||||||| |||| ||| ||| || || || || || |||||||||||| |||| Sbjct 1351 GGCCTGATCAACTACCTGATGCGCGACCGCCACGGGTCGCCGTTCGAGCACAACTCGATG 1292 Query 63955 AGCTTCCGAATCACGGCGCCCATATTCGTGTGGCGTGAGTTCATGCGCCATCGCATCGGC 64014 | |||| | |||||| || ||||||| || ||||||||||| || ||||||| Sbjct 1291 ACCTTCTACGTGCAGGCGCCGATCTTCGTGTTCCGCGAGTTCATGCGGCACCGCATCG-- 1234 Query 64015 TTCTCGTACAACGAACAGTCGGGTCGCTACATGGAGTTGCTGCCGGTCTTCTATATTCCG 64074 ||| |||||||| ||||||| |||||| ||| ||| ||| || ||||| | ||| Sbjct 1233 -CCTCCTACAACGAGGAGTCGGGCCGCTACCGCGAGCTGCGGCCCGTGTTCTACGTGCCG 1175 Query 64075 CCGGCTCATCGTCCACTGGTCCAGATCGGAAAGGCTGGCGCCTACACCTTCGTAGATGGT 64134 || | || ||||| ||| | || | ||||||||| ||| | || Sbjct 1174 TCGCGGGACCGGAACCTGGTGCAGGTGGGCCGCCCCGGCGCCTACGAGTTCCTGCCGGGC 1115 Query 64135 ACGGACGAGCAGCACG 64150 | ||||||||||||| Sbjct 1114 AGCGACGAGCAGCACG 1099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245225693045982