Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_025428.1
Length=59601
Score E
Sequences producing significant alignments: (Bits) Value
seq88363 86.0 2e-12
seq65096 82.4 3e-11
>seq88363
Length=878
Score = 86.0 bits (94), Expect = 2e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 10759 TTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAGGACATCGCGGACCAGGTGAAG 10818
|||||||||||| |||||||| |||||| || |||||| | | | ||| || | |||
Sbjct 492 TTCATCGAGCGCATCGAGCGCTTGGAGGAGGACAAGAAGACCGTGTCCGACGAGATCAAG 433
Query 10819 GAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACCAAGGTCATGCGCAAGATC 10875
|| ||| || |||||||||| ||||||||| |||| |||| |||||||||
Sbjct 432 GACGTCTACGCGGAGGCCAAGGGCACCGGCTACGACGTCAAGATCATCCGCAAGATC 376
>seq65096
Length=1447
Score = 82.4 bits (90), Expect = 3e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 10739 CCGCCTCCGAACTGCGCCAGTTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAGG 10798
||||| ||| ||| ||||||||||||||| | |||||||| |||| |||||| |
Sbjct 1284 CCGCCGACGAGCTGAAGCAGTTCATCGAGCGCCTGGAGCGCCTCGAGGAGGAGAAGGCCG 1225
Query 10799 ACATCGCGGACCAGGTGAAGGAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACCA 10858
|||| || | | | |||||||| | ||||| |||| || |||| |||| | |
Sbjct 1224 GCATCATGGGCGACATCAAGGAGGTGTTCGCCGAATTGAAGGGCCGCGGCTTCGACGCGA 1165
Query 10859 AGGTCATGCGCAAGATCATC 10878
||| | |||||| |||||||
Sbjct 1164 AGGCCGTGCGCACGATCATC 1145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190299235458934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |