Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_026591.1 Length=44716 Score E Sequences producing significant alignments: (Bits) Value seq103996 91.5 4e-14 seq37623 91.5 4e-14 seq105772 87.8 5e-13 >seq103996 Length=666 Score = 91.5 bits (100), Expect = 4e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1679 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAGTCCTG 1736 || ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 456 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 399 >seq37623 Length=2350 Score = 91.5 bits (100), Expect = 4e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1679 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAGTCCTG 1736 || ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 1361 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 1304 >seq105772 Length=647 Score = 87.8 bits (96), Expect = 5e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1679 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAGTCCTG 1736 || ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| Sbjct 556 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142742797405004