Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_028665.1
Length=56982
Score E
Sequences producing significant alignments: (Bits) Value
seq93363 118 4e-22
>seq93363
Length=802
Score = 118 bits (130), Expect = 4e-22
Identities = 181/254 (71%), Gaps = 8/254 (3%)
Strand=Plus/Minus
Query 5527 CAGCGTAACGCCGTGAGCAAGGCCAAGGATTACCTCGAATACTCGGCGTTCTCCCGTTCG 5586
|||| |||||||| | ||||||||| |||||||| | | | |||||||||| ||
Sbjct 748 CAGCAGAACGCCGTCAAGAAGGCCAAGTCCTACCTCGACTTCACCTCGTTCTCCCGCTCC 689
Query 5587 GGCCTGATCAAGCAACTCGCGTTCGAGGGATTCAGCGAC-GCCGACGCGACGTTCGCCGT 5645
|| ||||| ||| || | || |||||| ||| |||| |||||||| || | || |||
Sbjct 688 GGTTTGATCGGGCAGCTGGAGTACGAGGGCTTCT-CGACCGCCGACGCCACCTACGGCGT 630
Query 5646 CGACTCGCTCGACACCG---ATTGGGATGCGCAGGCGGTGAAGAAAGCCGCCGAGTACAT 5702
|| | || ||||| | ||| | | |||||| |||||| |||||| ||| |
Sbjct 629 GGAT---CACGTCACCGTGGACTGGTACGAGCAGGCCAAGAAGAAGGCCGCCTCCTACCT 573
Query 5703 GGATTACTCGTCGTTCTCGCAGCAGGGCCTCGTCGATCAACTCGTGTTCGAGGGATTCAC 5762
| | | | || ||||| | ||||||| | |||| || |||| || ||||||||||||
Sbjct 572 GCAGTTCAGCTCCTTCTCCCGGCAGGGCTTGATCGACCAGCTCGAGTACGAGGGATTCAC 513
Query 5763 GCAGGCGCAGGCCG 5776
|| | |||||||
Sbjct 512 CCACGATCAGGCCG 499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181931730503392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |