Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_028751.1
Length=58671
Score E
Sequences producing significant alignments: (Bits) Value
seq81249 109 2e-19
>seq81249
Length=1001
Score = 109 bits (120), Expect = 2e-19
Identities = 171/242 (71%), Gaps = 12/242 (5%)
Strand=Plus/Minus
Query 47679 GCAGCGTCGACGCCGTGGTTTGCGACCCGCCCTACGAGCTGGCCTTCATGGGCAAGAAGT 47738
||||||| ||||||| || ||| |||||||||| || | |||||||||| | |
Sbjct 242 GCAGCGTGCACGCCGTCGTCACCGATCCGCCCTACGCCCTCGACTTCATGGGCCACGGCT 183
Query 47739 GGGACGGCT-------CGGGTATCGCCTTCGATGT--CGAGATGTGGGA-GC--AATGCC 47786
|||| ||| ||| | || | || |||| ||||| || | ||||
Sbjct 182 GGGATCGCTACACCCCCGGCGAGTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCC 123
Query 47787 TGCGGGCCCTCAAACCTGGCGGGCACCTGCTCGCGTTCGGTGGCTCGCGTACCTGGCATC 47846
| || ||||||||| |||||||| || ||||| ||||| || | || |||| || |
Sbjct 122 TCCGCATCCTCAAACCCGGCGGGCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACC 63
Query 47847 GGCTGGCTGTGGCAATCGAGGACGCGGGCTTCGAGATTCGTGACTCTATCGCGTGGCTGT 47906
| || |||| | |||||||||||| || |||||||| || ||||| ||||||||||| |
Sbjct 62 GCCTCGCTGCCGGAATCGAGGACGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCT 3
Query 47907 AC 47908
||
Sbjct 2 AC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187327956494194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |