Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_028878.1 Length=76271 Score E Sequences producing significant alignments: (Bits) Value seq84105 93.3 2e-14 seq58668 84.2 1e-11 >seq84105 Length=948 Score = 93.3 bits (102), Expect = 2e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 66126 GGTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTACCAA 66185 |||| | |||||||| |||||||||||||||| ||||||| ||||| |||||||||||| Sbjct 713 GGTGGGCGCACAAGGGCTCGAACCTTGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAA 772 Query 66186 CTGAGCTAT 66194 ||||||||| Sbjct 773 CTGAGCTAT 781 >seq58668 Length=1734 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 66126 GGTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTACCAA 66185 |||| | ||| |||| |||||||| ||||||| ||||||| ||||| |||||||||||| Sbjct 12 GGTGGGCGCACTAGGGTTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAA 71 Query 66186 CTGAGCTAT 66194 ||||||||| Sbjct 72 CTGAGCTAT 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243545233490728