Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_028879.1
Length=43225
Score E
Sequences producing significant alignments: (Bits) Value
seq18219 89.7 1e-13
seq90483 87.8 5e-13
seq113191 82.4 2e-11
>seq18219
Length=9819
Score = 89.7 bits (98), Expect = 1e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 31257 CTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTT 31316
||| | ||| ||||||||||||| |||||| ||||||||||||||| ||||||||| |||
Sbjct 5832 CTGGGGCGGAAGGATTCGAACCTCCGAATGTCGGAATCAAAATCCGATGCCTTACCACTT 5891
Query 31317 GGCGACG 31323
|||||||
Sbjct 5892 GGCGACG 5898
>seq90483
Length=846
Score = 87.8 bits (96), Expect = 5e-13
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 31250 TTTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTT 31309
||| | |||| | ||| |||| ||||||||||||||| ||| ||||||| ||| ||||||
Sbjct 485 TTTATTGCTGGGGCGGAAGGACTCGAACCTACGAATGGCGGGATCAAAACCCGCTGCCTT 544
Query 31310 ACCGCTTGGCGACGGCGCAAA 31330
||| |||||||||| | ||||
Sbjct 545 ACCACTTGGCGACGCCCCAAA 565
>seq113191
Length=568
Score = 82.4 bits (90), Expect = 2e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 31257 CTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTT 31316
||| | ||||||||||||||||||||||| ||| | ||||| ||| ||||||||| |||
Sbjct 141 CTGAGACGGTAGGATTCGAACCTACGAATAGCGGGACCAAAACCCGCTGCCTTACCACTT 200
Query 31317 GGCGACGGCGCAAAA 31331
||| ||| | |||||
Sbjct 201 GGCCACGTCTCAAAA 215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137979166290566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |