Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_028920.1 Length=52530 Score E Sequences producing significant alignments: (Bits) Value seq81249 96.9 1e-15 >seq81249 Length=1001 Score = 96.9 bits (106), Expect = 1e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 41558 GTTGATCCAGGCGATGGAGTCACGAATCTCGAAGCCCGCGTCCTCGATGGCCACGGTCAG 41617 || || ||| ||||| ||||| || |||||||| || ||||||||||| | | | || Sbjct 1 GTAGAGCCACGCGATCGAGTCGCGGATCTCGAATCCGGCGTCCTCGATTCCGGCAGCGAG 60 Query 41618 CCGGTGCCAGGTGCGGGAGCCACCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCCG 41677 ||||| ||||||| | || ||||||||||| || ||||| ||||| ||||||| || Sbjct 61 GCGGTGGAAGGTGCGAGTACCGCCGAAGGCGAGGAGCTGCCCGCCGGGTTTGAGGATGCG 120 Query 41678 CAGGCA 41683 ||||| Sbjct 121 GAGGCA 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167707930556056