Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_028937.1
Length=58338
Score E
Sequences producing significant alignments: (Bits) Value
seq116094 98.7 4e-16
seq78850 96.9 1e-15
>seq116094
Length=536
Score = 98.7 bits (108), Expect = 4e-16
Identities = 128/176 (73%), Gaps = 6/176 (3%)
Strand=Plus/Plus
Query 40722 GCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGGAAACGCGAAA 40781
||| ||||| ||||| ||| |||||| |||||||||||| ||||| || | |||
Sbjct 34 GCGCTGTGCGCCCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGG---CTCGACC 90
Query 40782 CCCG---CAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATGCCTTCAGTGGGCG 40838
| || | ||||| ||||| ||||| ||||| | || ||||| ||| |||
Sbjct 91 CGCGAGGCCAAGCGCGTCTGCCAGTCCTGCGAGGTCCGCCAGGAGTGCCTGGAGTACGCG 150
Query 40839 CTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCG 40894
|||| |||| |||| | ||||||||||| ||||| || ||||| || ||||| ||
Sbjct 151 CTGGGCAACGACGAGCGGTTCGGCATCTGGGGCGGTCTCTCCGAACGCGAACGTCG 206
>seq78850
Length=1053
Score = 96.9 bits (106), Expect = 1e-15
Identities = 127/174 (73%), Gaps = 4/174 (2%)
Strand=Plus/Plus
Query 40723 CGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGGAA--ACGCGAA 40780
|| ||||| | ||| |||||| ||| ||||||||| |||||||| ||| |||||
Sbjct 549 CGCTGTGCGCGCAGACCGATCCTGAGGCGTTCTTCCCGGAAAAGGGTGGATCGACGCGCG 608
Query 40781 ACCCGCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATGCCTTCAGTGGGCGCT 40840
| || |||||||||||| |||||| ||| | | ||||| ||| |||||
Sbjct 609 AGGCG--AAGCGGATCTGCACGTCGTGCGAGGTCAAGTCGCAGTGCCTCGAGTACGCGCT 666
Query 40841 GGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCG 40894
| | ||| |||| | |||||||||| |||||||| |||||||| || |||||
Sbjct 667 GCAGAACGACGAGCGCTTCGGCATCTGGGGCGGCCTCTCCGAGCGCGAGCGCCG 720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 186264046929400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |