Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_028961.1 Length=55094 Score E Sequences producing significant alignments: (Bits) Value seq81249 109 2e-19 >seq81249 Length=1001 Score = 109 bits (120), Expect = 2e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 42296 CAGTGGTGCGCGCAGTGGGCGGCTGAGTGCTTGCGTGTGTTGAAACCGGGCGGTCACATG 42355 || ||||||| ||||||||| || |||||| | || | | ||||| ||||| || | Sbjct 153 CACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAACCCGGCGGGCAGCTC 94 Query 42356 TTGGCGTTCGGCGGCTCGCGCACCTGGCACCGGCTGGCGGTGGCGATCGAGGATGCCGGG 42415 | || |||||||| | ||||||| ||||| || || | | |||||||| ||||| Sbjct 93 CTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGAATCGAGGACGCCGGA 34 Query 42416 TTCGAGGTCCGTGACTCCATCGCGTGGCTGTAC 42448 |||||| |||| ||||| ||||||||||| ||| Sbjct 33 TTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175899714712608