Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_028965.1 Length=53219 Score E Sequences producing significant alignments: (Bits) Value seq95548 95.1 4e-15 >seq95548 Length=770 Score = 95.1 bits (104), Expect = 4e-15 Identities = 146/204 (72%), Gaps = 11/204 (5%) Strand=Plus/Plus Query 32781 AACGACAGGTGTCGATGGCGTTCAAGCTCTGTGAG-CACCGACCTGCTGGCCTCGATGTA 32839 ||||| | ||| || ||||| | ||||| ||| | || ||||| | | | || || Sbjct 1 AACGAGAAGTGCCGGTGGCGGACCAGCTC-GTGGGTCAGCGACCGGGAGACACCGGTGAG 59 Query 32840 GAACGTCG---CACTGCCGTGCTCCAGCACCGATTCGTGGCCCACGTCGAGGATGTGCTC 32896 | || ||| | ||||||||||| || ||||| ||| ||||| |||||||||||| Sbjct 60 GTACATCGACACGCTGCCGTGCTCGAGGACCGAGAGGTGCCCCACCTCGAGGATGTGCCG 119 Query 32897 GAGATAGGTCTCGTTGGTGGCCGTGGCCGGGTTCGGACGATTG---AACGACTGGTAGCA 32953 || ||| ||||||||||||| |||||| | | ||| ||||||||||||| Sbjct 120 CAGGTAGCCGGCGTTGGTGGCCGTCTGCGGGTTGG---GCTTGCCCCACGACTGGTAGCA 176 Query 32954 GGCGCGGCCTGCGAACTCAGCGAG 32977 ||| || || |||||||| || || Sbjct 177 GGCCCGCCCGGCGAACTCCGCCAG 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169909232928858