Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq83619 82.4 3e-11 >seq83619 Length=955 Score = 82.4 bits (90), Expect = 3e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 44302 CGGGTGCAAGCCCGGCGGCGTCGTGCTCGACCCGTTCCACGGTTCCGGCACAACGGGTCT 44361 || || ||||||||||| ||| ||||||||||| ||| ||| | ||||| ||||| Sbjct 388 CGCGTCCAAGCCCGGCGACGTGGTGCTCGACCCCTTCTTCGGCACGGGCACGACGGGCGC 447 Query 44362 GGTGGCGCTCGGTCTCGGCCGCCGCTACGTCGGCATCGAGCTGAACGCCGCCTAC 44416 |||||||| | | ||||||| || ||| |||||||||| || ||| |||| Sbjct 448 GGTGGCGCGCCGCTACGGCCGCACCTGCGTGGGCATCGAGCGCGACCCCGGCTAC 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182797554803870