Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1750 123 2e-23 seq10846 120 2e-22 seq16751 118 7e-22 seq13269 114 9e-21 seq3441 102 6e-17 seq8957 95.1 8e-15 seq9176 91.5 1e-13 seq23762 86.0 4e-12 seq7211 82.4 5e-11 >seq1750 Length=74028 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || |||||||| || || ||||| || |||||| | |||||||| | | Sbjct 62010 ATGCAGATATTTGTTAAAACTCTTACAGGAAAGACAATCACTTTGGAAGTTGAAAGCTCT 62069 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| |||||| | || |||||||| Sbjct 62070 GACACAATTGACAATGTCAAAGCGAAAA-TACAAGACAAGGAAGGTATTCCTCCAGATCA 62128 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || || | || || || | || ||||| Sbjct 62129 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGAACATTGGCTGACTACAA 62188 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 |||||| ||||||||||| || ||||| || Sbjct 62189 CATACAGAAAGAGTCCACCTTGCATTTGGT 62218 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || ||||| || || |||||||| || || | | Sbjct 61554 ATGCAGATCTTTGTCAAAACTCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 61613 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | ||| |||||| | ||||| ||||| | || |||||||| Sbjct 61614 GATACAATCGATAATGTCAAAGCAAAAA-TACAGGACAAGGAAGGAATCCCACCAGATCA 61672 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| ||||| |||| || | || ||| | | |||||||| Sbjct 61673 GCAGAGGCTGATCTTTGCCGGAAAACAGTTGGAGGATGGTCGTACTCTTGCTGATTACAA 61732 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| ||||| | || || ||| | | ||| |||| || Sbjct 61733 CATCCAGAAAGAATCCACCCTCCACTTGGTTCTTCGTTTGAGAGGTGG 61780 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || || || || ||||| |||||||| | Sbjct 61782 ATGCAGATTTTCGTCAAGACACTCACTGGGAAGACCATTACTCTTGAAGTTGAGAGTTCC 61841 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | |||| || ||||||||||| | || |||||||| Sbjct 61842 GATACCATAGATAATGTGAAGGCGAAAA-TTCAGGACAAAGAAGGCATTCCCCCAGATCA 61900 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||||| || || | || ||| | | |||||| || Sbjct 61901 GCAGAGGTTGATTTTTGCTGGAAAGCAACTTGAGGATGGCCGAACTCTGGCCGATTATAA 61960 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || ||||| ||| Sbjct 61961 CATTCAGAAGGAGTCTACA 61979 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| || || || ||||| || ||||| || || || || | Sbjct 62466 ATGCAGATTTTTGTTAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 62525 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | ||| ||| ||||| || || | || |||||||| Sbjct 62526 GACACCATTGATAATGTTAAAGC-AAAGATTCAGGACAAGGAGGGGATCCCACCAGATCA 62584 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || ||||| | ||||| | | |||||||| Sbjct 62585 GCAGAGGCTCATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACCCTGGCTGATTACAA 62644 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| ||||| ||| ||| | ||| | ||| Sbjct 62645 CATTCAAAAGGAGAGCACCCTGCATCTTGTT 62675 >seq10846 Length=19378 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| ||||| ||| | || |||||||| || ||| | || ||||| | | Sbjct 11503 AATGCAAATTTTTGTTAAGACCTTGACTGGAAAAACCATTACTTTGGAGGTTGAGAGCTC 11444 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || ||| |||| ||| | ||| | || | | |||||||| ||| | || || || | Sbjct 11443 TGATACTATTGATAATGTCAAAGCTAAGA-TCCAAGACAAAGAGGGTATCCCACCGGACC 11385 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 ||||| | | || ||||| ||||| || ||||||| | | | || |||| ||||||| Sbjct 11384 AACAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGAACCTTAGCTGATTACA 11325 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| ||||| ||||| || | || || || | | |||||||||||| Sbjct 11324 ACATTCAAAAGGAGTCGACCCTGCACTTGGTGCTGCGATTGCGAGGAGGA 11275 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| || || ||| | || |||||||| || ||| | |||||||| | | Sbjct 11731 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 11672 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | | ||| |||||| ||||| || ||| | || || ||||| Sbjct 11671 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCGGATCA 11612 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||||||||| || || ||||| | ||||| | | ||| || || Sbjct 11611 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACCCTTGCCGACTATAA 11552 Query 23790 CATACAAAAAGAGTCCAC 23807 || ||||| || ||||| Sbjct 11551 TATCCAAAAGGAATCCAC 11534 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||||||||| || || || || || ||| | |||||||| | | Sbjct 11958 ATGCAAATCTTTGTTAAAACCCTTACTGGGAAGACCATAACTTTGGAAGTTGAAAGCTCA 11899 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| ||||| | || || ||||| || ||| | || ||||| || Sbjct 11898 GACACTATAGATAATGTTAAAGC-TAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 11840 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| || || ||||| | ||||| | | || ||||| Sbjct 11839 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTTGCGGACTACAA 11780 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| || ||||| Sbjct 11779 CATCCAAAAGGAATCCAC 11762 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||||||||| ||| | || || || || || || | || ||||| | Sbjct 11047 AATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATAACCTTGGAGGTTGAAAGTTC 10988 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| | ||| | ||| ||| ||||| || || | || ||||||| Sbjct 10987 TGATACAATTGATAATGTGAAAGC-AAAGATTCAGGACAAGGAGGGAATTCCTCCAGATC 10929 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| |||||||| || ||||| | | | ||| | | ||||||| Sbjct 10928 AGCAGAGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGAAGGACTCTGGCTGATTACA 10869 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || ||||| ||||| || Sbjct 10868 ATATCCAAAAGGAGTCTAC 10850 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || || | || || ||||| || || | || ||||| | | Sbjct 11275 AATGCAGATTTTCGTGAAGACTTTGACTGGGAAAACCATAACCTTGGAGGTTGAAAGCTC 11216 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || ||| |||| ||| | || | ||| || ||||| |||||| |||| ||||| | Sbjct 11215 AGATACTATTGACAATGTGAAGGC-AAAGATACAAGACAAGGAAGGTATACCACCAGACC 11157 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | | || ||||| ||||| || || ||||| | | | ||| | | ||||||| Sbjct 11156 AGCAAAGGCTTATTTTTGCAGGCAAGCAGCTTGAAGATGGAAGGACTCTTGCAGATTACA 11097 Query 23789 ACATACAAAAAGAGTCCAC 23807 | ||||| || ||||| || Sbjct 11096 ATATACAGAAGGAGTCTAC 11078 >seq16751 Length=10463 Score = 118 bits (130), Expect = 7e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| || || ||| | || |||||||| || ||| | |||||||| | | Sbjct 6976 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 6917 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | | ||| |||||| ||||| || ||| | || ||||| || Sbjct 6916 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGACCA 6857 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||||||||||||||| ||||| | ||||| | | ||| ||||| Sbjct 6856 GCAGAGGTTGATCTTTGCCGGCAAACAACTTGAAGATGGTCGCACACTTGCCGACTACAA 6797 Query 23790 CATACAAAAAGAGTCCAC 23807 || ||||| || ||||| Sbjct 6796 TATCCAAAAGGAATCCAC 6779 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||||||||| ||| | || || || || || ||| | || ||||| | Sbjct 6064 AATGCAGATTTTCGTTAAGACCTTGACAGGGAAGACCATTACTTTGGAGGTTGAGAGTTC 6005 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | ||||| ||| ||| ||||| || || | || ||||| || Sbjct 6004 TGATACAATTGATAATGTAAAAGCAAAGATTCAGGACAAGGAGGGAATTCCCCCAGACCA 5945 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| |||||||| || ||||| | | | ||| | | |||||||| Sbjct 5944 GCAGAGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGAAGGACTCTGGCTGATTACAA 5885 Query 23790 CATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 5884 TATCCAAAAGGAGTCTAC 5867 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || || | || |||||||| || || | || ||||| | | Sbjct 6292 AATGCAGATTTTTGTGAAGACTTTGACCGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 6233 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| |||| ||| | || | || || ||||| |||||| | || ||||| | Sbjct 6232 AGACACTATTGACAATGTCAAGGC-TAAGATACAAGACAAGGAAGGTATCCCACCAGACC 6174 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || || ||||| ||||| | | | ||| | | ||||||| Sbjct 6173 AACAAAGGCTTATCTTTGCAGGAAAGCAACTTGAAGATGGAAGGACTCTTGCAGATTACA 6114 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || || || ||||| || Sbjct 6113 ATATCCAGAAGGAGTCTAC 6095 >seq13269 Length=14915 Score = 114 bits (126), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || |||||||| || || ||||| || |||||| | |||||||| | | Sbjct 13666 ATGCAGATCTTTGTTAAAACTCTTACAGGAAAGACAATCACTTTGGAAGTTGAAAGCTCA 13725 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| || ||| | || |||||||| Sbjct 13726 GACACCATTGATAATGTCAAAGCGAAGA-TACAAGACAAGGAGGGTATCCCTCCAGATCA 13784 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || || | || || || | ||| ||||| Sbjct 13785 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTTGAGGATGGTCGGACATTGGCCGACTACAA 13844 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || ||||||||||| || ||||| || Sbjct 13845 CATTCAGAAAGAGTCCACCTTGCATTTGGT 13874 Score = 113 bits (124), Expect = 3e-20 Identities = 172/241 (71%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 23599 TAATTA-CTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 |||||| || | |||||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct 13197 TAATTATCTGCAGATGCAGATCTTCGTCAAAACTCTCACTGGAAAGACCATAACTCTCGA 13256 Query 23658 AGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716 || || | | || || | || ||| | ||| |||||| | ||||| || || Sbjct 13257 GGTCGAGAGCTCTGATACAATAGATAATGTCAAAGCAAAAA-TACAGGACAAGGAGGGAA 13315 Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776 | || ||||| || ||| | | || ||||| |||||||| |||| || | || |||| Sbjct 13316 TCCCACCAGACCAGCAGAGGCTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGAACTT 13375 Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAG 23836 | | ||||||||||| || ||||| ||||| | || || ||| | | ||| |||| | Sbjct 13376 TGGCTGATTACAACATCCAGAAAGAATCCACCCTCCACTTGGTTCTTCGTTTGAGAGGTG 13435 Query 23837 G 23837 | Sbjct 13436 G 13436 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| ||||| || || ||||| |||||||| | Sbjct 13438 ATGCAGATTTTTGTCAAGACACTCACCGGAAAGACCATTACTCTTGAAGTTGAGAGTTCT 13497 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | |||| || ||||||||||| | || |||||||| Sbjct 13498 GATACAATAGATAATGTGAAGGCTAAAA-TTCAGGACAAAGAAGGAATTCCCCCAGATCA 13556 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || || || || || | || ||||| | ||||||||| Sbjct 13557 GCAGAGGCTGATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGAACTTTGGCCGATTACAA 13616 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || || || ||| Sbjct 13617 CATTCAGAAGGAATCTACA 13635 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || || || || ||||| || ||||| || || || || | | Sbjct 14121 AATGCAGATTTTTGTCAAGACTCTGACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTC 14180 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || | || ||| ||||| | ||| ||| || || ||||| | || || |||| Sbjct 14181 TGATACCATAGATAATGTTAAAGC-AAAGATTCAAGATAAGGAAGGGATTCCTCCGGATC 14239 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || |||||||| || || | |||||| | | ||||||| Sbjct 14240 AGCAGAGGCTCATCTTTGCTGGAAAACAACTTGAGGATGGCCGCACTCTGGCTGATTACA 14299 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 | || || || || || ||| | ||| | ||| Sbjct 14300 ATATTCAGAAGGAATCAACACTCCATCTTGTT 14331 >seq3441 Length=50379 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| ||||| ||||| || ||||| || || ||||| | | Sbjct 15057 ATGCAGATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAAAGCTCC 14998 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | ||| | |||| | ||||| || || | || |||||||| Sbjct 14997 GATACTATTGACAATGTGAAAGCGAAAA-TCCAGGACAAGGAGGGAATCCCACCAGATCA 14939 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || || || || |||||| ||||||| | || ||| | | ||| ||||| Sbjct 14938 GCAAAGGCTCATTTTCGCTGGTAAACAATTGGAAGATGGTCGAACTCTTGCCGACTACAA 14879 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 14878 TATCCAGAAAGAGTCCAC 14861 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || ||||| || |||||||| ||||| | || || || | | Sbjct 14830 AATGCAGATATTTGTCAAGACCCTGACTGGAAAAACCATCACCTTGGAGGTGGAAAGCTC 14771 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||| || |||| ||| | || |||||| | |||||||| ||| | || ||||| | Sbjct 14770 GGATACCATTGATAATGTCAAGGCAAAAA-TACAAGACAAAGAGGGTATCCCACCAGACC 14712 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || ||||||||||| || || ||||| | || || | | || || | Sbjct 14711 AGCAGAGGTTGATTTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACCCTTGCAGACTATA 14652 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||| ||||| || Sbjct 14651 ACATCCAAAAGGAGTCTAC 14633 >seq8957 Length=24100 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| ||||| || || || || || ||||| | || || || | Sbjct 15964 AAGATGCAGATCTTCGTGAAAACTCTGACCGGCAAGACCATCACGTTGGAGGTGGAGAGC 15905 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| ||||| | ||||| ||| Sbjct 15904 TCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGAT 15845 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| || || || ||||| || ||| ||||||||| || ||| | | ||| ||| Sbjct 15844 CAGCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGTACTCTCGCCGACTAC 15785 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || || ||||||||||| Sbjct 15784 AATATTCAGAAAGAGTCCAC 15765 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || |||||||| || ||||||||||| || | || || || | | Sbjct 15505 ATGCAGATCTTTGTGAAAACCCTAACTGGAAAAACGATTACCTTGGAGGTAGAGAGCTCC 15446 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | || ||||| || || | || || || || Sbjct 15445 GACACGATTGATAATGTCAAGGCCAAGA-TTCAAGACAAGGAGGGGATTCCACCGGACCA 15387 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | |||| || ||||| || ||| | || |||| ||||| | | |||||||| Sbjct 15386 GCAGAGGCTAATCTTCGCCGGGAAGCAATTAGAGGACGGCCGCACCCTCGCTGATTACAA 15327 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 15326 CATTCAGAAGGAGTCTAC 15309 >seq9176 Length=23001 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||| |||||| | || ||||| |||||| | | || ||||| ||||| ||| ||||| Sbjct 19880 GACAAGGAAGGTATCCCCCCAGACCAACAGAGGCTGATTTTTGCTGGCAAGCAATTGGAA 19939 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | || ||| | | ||||||||||| ||||| ||||| ||| | || | ||||| Sbjct 19940 GATGGTCGAACTCTTGCTGATTACAACATCCAAAAGGAGTCGACACTTCACCTGGTTTTG 19999 Query 23824 AGGTTGCGAGGAGGA 23838 || | || |||||| Sbjct 20000 AGACTTCGGGGAGGA 20014 >seq23762 Length=5545 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || || | || |||||||| || || | || ||||| | | Sbjct 880 AATGCAGATTTTTGTGAAGACTTTGACTGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 939 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| |||| ||| | || | || || ||||| |||||| | || | ||| | Sbjct 940 AGACACTATTGACAATGTCAAGGC-CAAGATACAAGACAAGGAAGGTATCCCACTAGACC 998 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || | ||||| ||||| | | | ||| | | ||||||| Sbjct 999 AACAAAGGCTTATCTTTGCAGGAACGCAACTTGAAGATGGAAGGACTCTTGCAGATTACA 1058 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 | || ||||| ||||| || | ||| |||| Sbjct 1059 ATATCCAAAAGGAGTCTACCCTTCATCTAGT 1089 >seq7211 Length=36427 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || ||||| || || || || || ||||| | || || || | Sbjct 7529 AAGATGCAGATCTTTGTGAAAACTCTGACCGGCAAGACCATCACGTTGGAGGTGGAGAGC 7588 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || ||| || || ||||| | ||||| || Sbjct 7589 TCCGACACCATCGACAACGTGAAGGCCAAGATTTAGGATAAGGAAGGGATTCCGCCGGAC 7648 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || || ||||| |||||| |||| |||| || || | | ||||||| Sbjct 7649 CAGCAGAGGCTCATCTTCGCCGGGAAACAATTGGAGGACGGTCGTACCCTCGCCGATTAC 7708 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || |||||||| || | ||| | || | ||| | || ||||| Sbjct 7709 AACATTCAGAAAGAGTCAACGCTCCATCTCGTGCTCAGGCTCCGTGGAGG 7758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337459281183212