Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 123 2e-23
seq10846 120 2e-22
seq16751 118 7e-22
seq13269 114 9e-21
seq3441 102 6e-17
seq8957 95.1 8e-15
seq9176 91.5 1e-13
seq23762 86.0 4e-12
seq7211 82.4 5e-11
>seq1750
Length=74028
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || |||||||| || || ||||| || |||||| | |||||||| | |
Sbjct 62010 ATGCAGATATTTGTTAAAACTCTTACAGGAAAGACAATCACTTTGGAAGTTGAAAGCTCT 62069
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||| | ||||| |||||| | || ||||||||
Sbjct 62070 GACACAATTGACAATGTCAAAGCGAAAA-TACAAGACAAGGAAGGTATTCCTCCAGATCA 62128
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || || || || || | || || || | || |||||
Sbjct 62129 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGAACATTGGCTGACTACAA 62188
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
|||||| ||||||||||| || ||||| ||
Sbjct 62189 CATACAGAAAGAGTCCACCTTGCATTTGGT 62218
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| || || ||||| || || |||||||| || || | |
Sbjct 61554 ATGCAGATCTTTGTCAAAACTCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 61613
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | ||| |||||| | ||||| ||||| | || ||||||||
Sbjct 61614 GATACAATCGATAATGTCAAAGCAAAAA-TACAGGACAAGGAAGGAATCCCACCAGATCA 61672
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| ||||| |||| || | || ||| | | ||||||||
Sbjct 61673 GCAGAGGCTGATCTTTGCCGGAAAACAGTTGGAGGATGGTCGTACTCTTGCTGATTACAA 61732
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || ||||| ||||| | || || ||| | | ||| |||| ||
Sbjct 61733 CATCCAGAAAGAATCCACCCTCCACTTGGTTCTTCGTTTGAGAGGTGG 61780
Score = 104 bits (114), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| || || || || ||||| |||||||| |
Sbjct 61782 ATGCAGATTTTCGTCAAGACACTCACTGGGAAGACCATTACTCTTGAAGTTGAGAGTTCC 61841
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || | |||| || ||||||||||| | || ||||||||
Sbjct 61842 GATACCATAGATAATGTGAAGGCGAAAA-TTCAGGACAAAGAAGGCATTCCCCCAGATCA 61900
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || || ||||| || || | || ||| | | |||||| ||
Sbjct 61901 GCAGAGGTTGATTTTTGCTGGAAAGCAACTTGAGGATGGCCGAACTCTGGCCGATTATAA 61960
Query 23790 CATACAAAAAGAGTCCACA 23808
||| || || ||||| |||
Sbjct 61961 CATTCAGAAGGAGTCTACA 61979
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| ||||| || || || ||||| || ||||| || || || || |
Sbjct 62466 ATGCAGATTTTTGTTAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 62525
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| ||||| | ||| ||| ||||| || || | || ||||||||
Sbjct 62526 GACACCATTGATAATGTTAAAGC-AAAGATTCAGGACAAGGAGGGGATCCCACCAGATCA 62584
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || || || ||||| | ||||| | | ||||||||
Sbjct 62585 GCAGAGGCTCATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACCCTGGCTGATTACAA 62644
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| ||||| ||| ||| | ||| | |||
Sbjct 62645 CATTCAAAAGGAGAGCACCCTGCATCTTGTT 62675
>seq10846
Length=19378
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| ||||| ||||| ||| | || |||||||| || ||| | || ||||| | |
Sbjct 11503 AATGCAAATTTTTGTTAAGACCTTGACTGGAAAAACCATTACTTTGGAGGTTGAGAGCTC 11444
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| ||| |||| ||| | ||| | || | | |||||||| ||| | || || || |
Sbjct 11443 TGATACTATTGATAATGTCAAAGCTAAGA-TCCAAGACAAAGAGGGTATCCCACCGGACC 11385
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
||||| | | || ||||| ||||| || ||||||| | | | || |||| |||||||
Sbjct 11384 AACAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGAACCTTAGCTGATTACA 11325
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| ||||| ||||| || | || || || | | ||||||||||||
Sbjct 11324 ACATTCAAAAGGAGTCGACCCTGCACTTGGTGCTGCGATTGCGAGGAGGA 11275
Score = 105 bits (116), Expect = 5e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| ||||| || || ||| | || |||||||| || ||| | |||||||| | |
Sbjct 11731 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 11672
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| | | ||| |||||| ||||| || ||| | || || |||||
Sbjct 11671 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCGGATCA 11612
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||||||||| || || ||||| | ||||| | | ||| || ||
Sbjct 11611 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACCCTTGCCGACTATAA 11552
Query 23790 CATACAAAAAGAGTCCAC 23807
|| ||||| || |||||
Sbjct 11551 TATCCAAAAGGAATCCAC 11534
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || ||||||||||| || || || || || ||| | |||||||| | |
Sbjct 11958 ATGCAAATCTTTGTTAAAACCCTTACTGGGAAGACCATAACTTTGGAAGTTGAAAGCTCA 11899
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| ||||| | || || ||||| || ||| | || ||||| ||
Sbjct 11898 GACACTATAGATAATGTTAAAGC-TAAGATCCAAGACAAGGAGGGTATCCCACCAGACCA 11840
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| ||||| || || ||||| | ||||| | | || |||||
Sbjct 11839 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTTGCGGACTACAA 11780
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| || |||||
Sbjct 11779 CATCCAAAAGGAATCCAC 11762
Score = 95.1 bits (104), Expect = 8e-15
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||||||||| ||| | || || || || || || | || ||||| |
Sbjct 11047 AATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATAACCTTGGAGGTTGAAAGTTC 10988
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||| ||| | ||| | ||| ||| ||||| || || | || |||||||
Sbjct 10987 TGATACAATTGATAATGTGAAAGC-AAAGATTCAGGACAAGGAGGGAATTCCTCCAGATC 10929
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| ||| | | || ||||| |||||||| || ||||| | | | ||| | | |||||||
Sbjct 10928 AGCAGAGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGAAGGACTCTGGCTGATTACA 10869
Query 23789 ACATACAAAAAGAGTCCAC 23807
| || ||||| ||||| ||
Sbjct 10868 ATATCCAAAAGGAGTCTAC 10850
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || | || || ||||| || || | || ||||| | |
Sbjct 11275 AATGCAGATTTTCGTGAAGACTTTGACTGGGAAAACCATAACCTTGGAGGTTGAAAGCTC 11216
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| ||| |||| ||| | || | ||| || ||||| |||||| |||| ||||| |
Sbjct 11215 AGATACTATTGACAATGTGAAGGC-AAAGATACAAGACAAGGAAGGTATACCACCAGACC 11157
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| || | | || ||||| ||||| || || ||||| | | | ||| | | |||||||
Sbjct 11156 AGCAAAGGCTTATTTTTGCAGGCAAGCAGCTTGAAGATGGAAGGACTCTTGCAGATTACA 11097
Query 23789 ACATACAAAAAGAGTCCAC 23807
| ||||| || ||||| ||
Sbjct 11096 ATATACAGAAGGAGTCTAC 11078
>seq16751
Length=10463
Score = 118 bits (130), Expect = 7e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| ||||| || || ||| | || |||||||| || ||| | |||||||| | |
Sbjct 6976 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 6917
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| | | ||| |||||| ||||| || ||| | || ||||| ||
Sbjct 6916 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGACCA 6857
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||||||||||||||| ||||| | ||||| | | ||| |||||
Sbjct 6856 GCAGAGGTTGATCTTTGCCGGCAAACAACTTGAAGATGGTCGCACACTTGCCGACTACAA 6797
Query 23790 CATACAAAAAGAGTCCAC 23807
|| ||||| || |||||
Sbjct 6796 TATCCAAAAGGAATCCAC 6779
Score = 96.9 bits (106), Expect = 2e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||||||||| ||| | || || || || || ||| | || ||||| |
Sbjct 6064 AATGCAGATTTTCGTTAAGACCTTGACAGGGAAGACCATTACTTTGGAGGTTGAGAGTTC 6005
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| | ||||| ||| ||| ||||| || || | || ||||| ||
Sbjct 6004 TGATACAATTGATAATGTAAAAGCAAAGATTCAGGACAAGGAGGGAATTCCCCCAGACCA 5945
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| |||||||| || ||||| | | | ||| | | ||||||||
Sbjct 5944 GCAGAGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGAAGGACTCTGGCTGATTACAA 5885
Query 23790 CATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 5884 TATCCAAAAGGAGTCTAC 5867
Score = 86.0 bits (94), Expect = 4e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || | || |||||||| || || | || ||||| | |
Sbjct 6292 AATGCAGATTTTTGTGAAGACTTTGACCGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 6233
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|||||| |||| ||| | || | || || ||||| |||||| | || ||||| |
Sbjct 6232 AGACACTATTGACAATGTCAAGGC-TAAGATACAAGACAAGGAAGGTATCCCACCAGACC 6174
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | | || ||||| || || ||||| ||||| | | | ||| | | |||||||
Sbjct 6173 AACAAAGGCTTATCTTTGCAGGAAAGCAACTTGAAGATGGAAGGACTCTTGCAGATTACA 6114
Query 23789 ACATACAAAAAGAGTCCAC 23807
| || || || ||||| ||
Sbjct 6113 ATATCCAGAAGGAGTCTAC 6095
>seq13269
Length=14915
Score = 114 bits (126), Expect = 9e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || |||||||| || || ||||| || |||||| | |||||||| | |
Sbjct 13666 ATGCAGATCTTTGTTAAAACTCTTACAGGAAAGACAATCACTTTGGAAGTTGAAAGCTCA 13725
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | || | | ||||| || ||| | || ||||||||
Sbjct 13726 GACACCATTGATAATGTCAAAGCGAAGA-TACAAGACAAGGAGGGTATCCCTCCAGATCA 13784
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || || || || || | || || || | ||| |||||
Sbjct 13785 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTTGAGGATGGTCGGACATTGGCCGACTACAA 13844
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || ||||||||||| || ||||| ||
Sbjct 13845 CATTCAGAAAGAGTCCACCTTGCATTTGGT 13874
Score = 113 bits (124), Expect = 3e-20
Identities = 172/241 (71%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 23599 TAATTA-CTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657
|||||| || | |||||||| ||||| ||||| ||||| ||||| || || ||||||||
Sbjct 13197 TAATTATCTGCAGATGCAGATCTTCGTCAAAACTCTCACTGGAAAGACCATAACTCTCGA 13256
Query 23658 AGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716
|| || | | || || | || ||| | ||| |||||| | ||||| || ||
Sbjct 13257 GGTCGAGAGCTCTGATACAATAGATAATGTCAAAGCAAAAA-TACAGGACAAGGAGGGAA 13315
Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776
| || ||||| || ||| | | || ||||| |||||||| |||| || | || ||||
Sbjct 13316 TCCCACCAGACCAGCAGAGGCTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGAACTT 13375
Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAG 23836
| | ||||||||||| || ||||| ||||| | || || ||| | | ||| |||| |
Sbjct 13376 TGGCTGATTACAACATCCAGAAAGAATCCACCCTCCACTTGGTTCTTCGTTTGAGAGGTG 13435
Query 23837 G 23837
|
Sbjct 13436 G 13436
Score = 95.1 bits (104), Expect = 8e-15
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || ||||| ||||| || || ||||| |||||||| |
Sbjct 13438 ATGCAGATTTTTGTCAAGACACTCACCGGAAAGACCATTACTCTTGAAGTTGAGAGTTCT 13497
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || | |||| || ||||||||||| | || ||||||||
Sbjct 13498 GATACAATAGATAATGTGAAGGCTAAAA-TTCAGGACAAAGAAGGAATTCCCCCAGATCA 13556
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || || || || || || || || || | || ||||| | |||||||||
Sbjct 13557 GCAGAGGCTGATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGAACTTTGGCCGATTACAA 13616
Query 23790 CATACAAAAAGAGTCCACA 23808
||| || || || || |||
Sbjct 13617 CATTCAGAAGGAATCTACA 13635
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || || || ||||| || ||||| || || || || | |
Sbjct 14121 AATGCAGATTTTTGTCAAGACTCTGACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTC 14180
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || | || ||| ||||| | ||| ||| || || ||||| | || || ||||
Sbjct 14181 TGATACCATAGATAATGTTAAAGC-AAAGATTCAAGATAAGGAAGGGATTCCTCCGGATC 14239
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| ||| | | || ||||| || |||||||| || || | |||||| | | |||||||
Sbjct 14240 AGCAGAGGCTCATCTTTGCTGGAAAACAACTTGAGGATGGCCGCACTCTGGCTGATTACA 14299
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820
| || || || || || ||| | ||| | |||
Sbjct 14300 ATATTCAGAAGGAATCAACACTCCATCTTGTT 14331
>seq3441
Length=50379
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| ||||| ||||| || ||||| || || ||||| | |
Sbjct 15057 ATGCAGATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAAAGCTCC 14998
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | ||| | |||| | ||||| || || | || ||||||||
Sbjct 14997 GATACTATTGACAATGTGAAAGCGAAAA-TCCAGGACAAGGAGGGAATCCCACCAGATCA 14939
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | | || || || || |||||| ||||||| | || ||| | | ||| |||||
Sbjct 14938 GCAAAGGCTCATTTTCGCTGGTAAACAATTGGAAGATGGTCGAACTCTTGCCGACTACAA 14879
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 14878 TATCCAGAAAGAGTCCAC 14861
Score = 100 bits (110), Expect = 2e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| || || || ||||| || |||||||| ||||| | || || || | |
Sbjct 14830 AATGCAGATATTTGTCAAGACCCTGACTGGAAAAACCATCACCTTGGAGGTGGAAAGCTC 14771
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||| || |||| ||| | || |||||| | |||||||| ||| | || ||||| |
Sbjct 14770 GGATACCATTGATAATGTCAAGGCAAAAA-TACAAGACAAAGAGGGTATCCCACCAGACC 14712
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| ||| | || || ||||||||||| || || ||||| | || || | | || || |
Sbjct 14711 AGCAGAGGTTGATTTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACCCTTGCAGACTATA 14652
Query 23789 ACATACAAAAAGAGTCCAC 23807
|||| ||||| ||||| ||
Sbjct 14651 ACATCCAAAAGGAGTCTAC 14633
>seq8957
Length=24100
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| ||||| || || || || || ||||| | || || || |
Sbjct 15964 AAGATGCAGATCTTCGTGAAAACTCTGACCGGCAAGACCATCACGTTGGAGGTGGAGAGC 15905
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || || ||||| ||||| | ||||| |||
Sbjct 15904 TCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGAT 15845
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| || || || ||||| || ||| ||||||||| || ||| | | ||| |||
Sbjct 15844 CAGCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGTACTCTCGCCGACTAC 15785
Query 23788 AACATACAAAAAGAGTCCAC 23807
|| || || |||||||||||
Sbjct 15784 AATATTCAGAAAGAGTCCAC 15765
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || |||||||| || ||||||||||| || | || || || | |
Sbjct 15505 ATGCAGATCTTTGTGAAAACCCTAACTGGAAAAACGATTACCTTGGAGGTAGAGAGCTCC 15446
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | || ||||| || || | || || || ||
Sbjct 15445 GACACGATTGATAATGTCAAGGCCAAGA-TTCAAGACAAGGAGGGGATTCCACCGGACCA 15387
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | |||| || ||||| || ||| | || |||| ||||| | | ||||||||
Sbjct 15386 GCAGAGGCTAATCTTCGCCGGGAAGCAATTAGAGGACGGCCGCACCCTCGCTGATTACAA 15327
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 15326 CATTCAGAAGGAGTCTAC 15309
>seq9176
Length=23001
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| |||||| | || ||||| |||||| | | || ||||| ||||| ||| |||||
Sbjct 19880 GACAAGGAAGGTATCCCCCCAGACCAACAGAGGCTGATTTTTGCTGGCAAGCAATTGGAA 19939
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | || ||| | | ||||||||||| ||||| ||||| ||| | || | |||||
Sbjct 19940 GATGGTCGAACTCTTGCTGATTACAACATCCAAAAGGAGTCGACACTTCACCTGGTTTTG 19999
Query 23824 AGGTTGCGAGGAGGA 23838
|| | || ||||||
Sbjct 20000 AGACTTCGGGGAGGA 20014
>seq23762
Length=5545
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || | || |||||||| || || | || ||||| | |
Sbjct 880 AATGCAGATTTTTGTGAAGACTTTGACTGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 939
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|||||| |||| ||| | || | || || ||||| |||||| | || | ||| |
Sbjct 940 AGACACTATTGACAATGTCAAGGC-CAAGATACAAGACAAGGAAGGTATCCCACTAGACC 998
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | | || ||||| || | ||||| ||||| | | | ||| | | |||||||
Sbjct 999 AACAAAGGCTTATCTTTGCAGGAACGCAACTTGAAGATGGAAGGACTCTTGCAGATTACA 1058
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819
| || ||||| ||||| || | ||| ||||
Sbjct 1059 ATATCCAAAAGGAGTCTACCCTTCATCTAGT 1089
>seq7211
Length=36427
Score = 82.4 bits (90), Expect = 5e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || ||||| || || || || || ||||| | || || || |
Sbjct 7529 AAGATGCAGATCTTTGTGAAAACTCTGACCGGCAAGACCATCACGTTGGAGGTGGAGAGC 7588
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || ||| || || ||||| | ||||| ||
Sbjct 7589 TCCGACACCATCGACAACGTGAAGGCCAAGATTTAGGATAAGGAAGGGATTCCGCCGGAC 7648
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || || ||||| |||||| |||| |||| || || | | |||||||
Sbjct 7649 CAGCAGAGGCTCATCTTCGCCGGGAAACAATTGGAGGACGGTCGTACCCTCGCCGATTAC 7708
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| || |||||||| || | ||| | || | ||| | || |||||
Sbjct 7709 AACATTCAGAAAGAGTCAACGCTCCATCTCGTGCTCAGGCTCCGTGGAGG 7758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337459281183212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |