Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq72789 86.0 5e-12 >seq72789 Length=1199 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 29638 CTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GA 29696 ||| | | ||| || || | ||||||||| || || || |||||||||| ||| || | Sbjct 549 CTGTACCTTCAACGCCTCGATGTGGTCAAGATAAACATGTGCATCTCCCATGGTATGCGT 608 Query 29697 CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGC 29756 ||| || | | || || | | ||| || |||| ||||| ||| | ||| | ||||| Sbjct 609 AAAAGTCCCAGGCGTCAAGTC-GCAGACATGTGCCAGCATGTGCGTCAAGAGTGCGTAGC 667 Query 29757 TGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790 | ||||| || || ||||| |||||||||||||| Sbjct 668 TAGCGATATTGAATGGCACACCGAGCCCCATGTC 701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405501919220854