Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_030911.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq115307 192 2e-44 >seq115307 Length=544 Score = 192 bits (212), Expect = 2e-44 Identities = 163/201 (81%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 36171 ATGGCAGGCGAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGG 36230 ||||| || |||||| |||||||| | ||||| ||||| || ||| || |||||||| Sbjct 208 ATGGCGGGTGAAACCGTCATCACGCTGATCGGGAACCTCACGAACGACCCCGAACTGCGC 149 Query 36231 TTCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTC 36290 ||||| ||||| || || ||||| || |||||||||||||| |||||||| || |||| Sbjct 148 TTCACCCCGTCGGGTGCCGCGGTGGCCAACTTCACGGTCGCCTCGACTCCCCGCACGTTC 89 Query 36291 GACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTGTGG 36350 ||||| | |||||||||||||||||||||| ||||||||||||| ||| | ||| Sbjct 88 GACCGTCAGTCGAACGAGTGGAAGGACGGCGAGACGCTGTTCATGCGTTGCGCGATCTGG 29 Query 36351 CGTGACGCGGCGGAGAACGTC 36371 || || ||||||||||||||| Sbjct 28 CGCGAAGCGGCGGAGAACGTC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146391400176760