Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_030916.1 Length=56212 Score E Sequences producing significant alignments: (Bits) Value seq116094 98.7 4e-16 >seq116094 Length=536 Score = 98.7 bits (108), Expect = 4e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 46491 TGGCACGACCTCGGCCTCTGCCGCGAGGTCGACCCGGACCTGTGGTTCCCCGAGCGGGGC 46550 ||||| || |||| || ||| | || |||||| || || ||||||||| |||| Sbjct 22 TGGCAGGAACTCGCGCTGTGCGCCCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGC 81 Query 46551 GGATCGACCCGCGACGCGAAGCGGATCTGCAGGCGCTGCCCCGTCCAGGAGAAGTGCCTG 46610 || ||||||||||| || ||||| ||||| | |||| |||| || |||||||| Sbjct 82 GGCTCGACCCGCGAGGCCAAGCGCGTCTGCCAGTCCTGCGAGGTCCGCCAGGAGTGCCTG 141 Query 46611 CAGCAGGCACTCGACGCGGGGGAGCGGTTCGGAGTGTGGGGCGGCGTCAGCGAACGCGAA 46670 || | || || | | | ||||||||||| | |||||||| || |||||||||| Sbjct 142 GAGTACGCGCTGGGCAACGACGAGCGGTTCGGCATCTGGGGCGGTCTCTCCGAACGCGAA 201 Query 46671 CGCCGCC 46677 || |||| Sbjct 202 CGTCGCC 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179471639317532