Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq100898 82.4 8e-11 >seq100898 Length=703 Score = 82.4 bits (90), Expect = 8e-11 Identities = 118/163 (72%), Gaps = 9/163 (6%) Strand=Plus/Minus Query 66411 CCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA-TCCAGCTGAG 66469 ||| ||||| |||||||| |||| || |||||||||| ||||||||| ||| ||||| Sbjct 611 CCTGCAGGAATCGAACCTACGACCCACAACTTAGAAGGCTGTTGCTCTAATCCTACTGAG 552 Query 66470 CTAAGAGTGCATT---AATTTGGTGTC---CAAGGTGGGATTTGAACCCACAATCCATAA 66523 ||||| | | || ||||| | | || | ||| ||||||| | ||||| || Sbjct 551 CTAAGGATACTTTTACAATTTTTTCTTACTCACTATCGGACTTGAACCGATAATCCTAAA 492 Query 66524 GGCGGGA--GATTTTAAATCTCCTGTGTATACCAGTTCCACCA 66564 || | |||||||| ||| ||||||||||| || ||||| Sbjct 491 ATAGGTACAGATTTTAAGTCTGTTGTGTATACCAATTTCACCA 449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521243339406840