Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031035.1 Length=61626 Score E Sequences producing significant alignments: (Bits) Value seq103996 98.7 4e-16 seq37623 98.7 4e-16 seq105772 93.3 2e-14 >seq103996 Length=666 Score = 98.7 bits (108), Expect = 4e-16 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 852 GGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 910 ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 457 GGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 399 >seq37623 Length=2350 Score = 98.7 bits (108), Expect = 4e-16 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 852 GGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 910 ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1362 GGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 1304 >seq105772 Length=647 Score = 93.3 bits (102), Expect = 2e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 852 GGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 910 ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 557 GGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196768955785384