Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq82131 100 2e-16 >seq82131 Length=972 Score = 100 bits (110), Expect = 2e-16 Identities = 134/182 (74%), Gaps = 7/182 (4%) Strand=Plus/Plus Query 41799 GAAGATCTCCTGCCGTTCAGCGGCGAGAAGATCGTGCGCGCCG-CGATCTCCTGCAC-CA 41856 || || || ||||| ||| || |||| | |||| ||||| | || | | || | || Sbjct 195 GAGGACCTGCTGCCCTTCTCCGACGAGGGGCTCGTCCGCGCGGTCG--CCGCGGCGCGCA 252 Query 41857 CGCCTGTCGTCTCGGCCATCGGCCACGAGCCTGACAATCCCGTCCTGGACGACGTCGCCG 41916 |||| || ||| ||||||||||||||| ||||| || |||| ||| |||||||| Sbjct 253 CGCCGGTGGTCAGCGCCATCGGCCACGAGAGCGACAACCCGATCCTCGACCTCGTCGCCG 312 Query 41917 ACTTCCGAGCCGCAACACCGACCGACGCCGCGAAGAACGTCGTGCCCGACATGGTCGCCG 41976 || | || ||| | || ||||||||||| || ||| |||||||||||| ||||||| Sbjct 313 ACGTGCGCGCCTCGACGCCGACCGACGCGGCCAAGCGGGTCGTGCCCGAC---GTCGCCG 369 Query 41977 AG 41978 || Sbjct 370 AG 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295649064073689