Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq35939 89.7 8e-13
seq21442 89.7 8e-13
seq14339 89.7 8e-13
>seq35939
Length=2552
Score = 89.7 bits (98), Expect = 8e-13
Identities = 56/59 (95%), Gaps = 1/59 (2%)
Strand=Plus/Minus
Query 4594 TTAGCTCAGTTGGT-AGAGCGCACCCCTGATAAGGGTGAGGCCACTGGTTCAAGTCCAG 4651
|||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 1785 TTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGCCGCTGGTTCAAATCCAG 1727
>seq21442
Length=6721
Score = 89.7 bits (98), Expect = 8e-13
Identities = 56/59 (95%), Gaps = 1/59 (2%)
Strand=Plus/Minus
Query 4594 TTAGCTCAGTTGGT-AGAGCGCACCCCTGATAAGGGTGAGGCCACTGGTTCAAGTCCAG 4651
|||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 5932 TTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGCCGCTGGTTCAAATCCAG 5874
>seq14339
Length=17663
Score = 89.7 bits (98), Expect = 8e-13
Identities = 62/68 (91%), Gaps = 2/68 (3%)
Strand=Plus/Minus
Query 4585 AAATGCG-TCTTAGCTCAGTTGGT-AGAGCGCACCCCTGATAAGGGTGAGGCCACTGGTT 4642
||||| | | |||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 5454 AAATGGGCTATTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGCCGCTGGTT 5395
Query 4643 CAAGTCCA 4650
||| ||||
Sbjct 5394 CAAATCCA 5387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769020892893240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |