Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031238.1 Length=53411 Score E Sequences producing significant alignments: (Bits) Value seq95548 96.9 1e-15 >seq95548 Length=770 Score = 96.9 bits (106), Expect = 1e-15 Identities = 144/201 (72%), Gaps = 5/201 (2%) Strand=Plus/Plus Query 32733 AACGACAGGTGTCGATGGCGCTCAAGCTCTGTGAG-CACCGACCTGCTGGCCTCGATGTA 32791 ||||| | ||| || ||||| | ||||| ||| | || ||||| | | | || || Sbjct 1 AACGAGAAGTGCCGGTGGCGGACCAGCTC-GTGGGTCAGCGACCGGGAGACACCGGTGAG 59 Query 32792 GAACGTCG---CACTGCCGTGCTCCAGCACCGATTCGTGGCCCACGTCGAGGATGTGCTC 32848 | || ||| | ||||||||||| || ||||| ||| ||||| |||||||||||| Sbjct 60 GTACATCGACACGCTGCCGTGCTCGAGGACCGAGAGGTGCCCCACCTCGAGGATGTGCCG 119 Query 32849 TAGATAGGTCTCGTTGGTGGCCGTGGCCGGGTTCGGACGGTTGAACGACTGGTAGCAGGC 32908 || ||| ||||||||||||| |||||| || | |||||||||||||||| Sbjct 120 CAGGTAGCCGGCGTTGGTGGCCGTCTGCGGGTTGGGCTTGCCCCACGACTGGTAGCAGGC 179 Query 32909 GCGGCCTGCGAACTCAGCGAG 32929 || || |||||||| || || Sbjct 180 CCGCCCGGCGAACTCCGCCAG 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170522658263514