Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_031238.1
Length=53411
Score E
Sequences producing significant alignments: (Bits) Value
seq95548 96.9 1e-15
>seq95548
Length=770
Score = 96.9 bits (106), Expect = 1e-15
Identities = 144/201 (72%), Gaps = 5/201 (2%)
Strand=Plus/Plus
Query 32733 AACGACAGGTGTCGATGGCGCTCAAGCTCTGTGAG-CACCGACCTGCTGGCCTCGATGTA 32791
||||| | ||| || ||||| | ||||| ||| | || ||||| | | | || ||
Sbjct 1 AACGAGAAGTGCCGGTGGCGGACCAGCTC-GTGGGTCAGCGACCGGGAGACACCGGTGAG 59
Query 32792 GAACGTCG---CACTGCCGTGCTCCAGCACCGATTCGTGGCCCACGTCGAGGATGTGCTC 32848
| || ||| | ||||||||||| || ||||| ||| ||||| ||||||||||||
Sbjct 60 GTACATCGACACGCTGCCGTGCTCGAGGACCGAGAGGTGCCCCACCTCGAGGATGTGCCG 119
Query 32849 TAGATAGGTCTCGTTGGTGGCCGTGGCCGGGTTCGGACGGTTGAACGACTGGTAGCAGGC 32908
|| ||| ||||||||||||| |||||| || | ||||||||||||||||
Sbjct 120 CAGGTAGCCGGCGTTGGTGGCCGTCTGCGGGTTGGGCTTGCCCCACGACTGGTAGCAGGC 179
Query 32909 GCGGCCTGCGAACTCAGCGAG 32929
|| || |||||||| || ||
Sbjct 180 CCGCCCGGCGAACTCCGCCAG 200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170522658263514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |