Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_031243.1
Length=42395
Score E
Sequences producing significant alignments: (Bits) Value
seq81249 145 2e-30
>seq81249
Length=1001
Score = 145 bits (160), Expect = 2e-30
Identities = 128/160 (80%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 36909 GTTTCAGCAGTGGTGCGCGCAGTGGGCGGCTGAGTGCTTGCGCGTGTTGAAACCGGGCGG 36968
||| ||||| ||||||| ||||||||| || |||||| | ||| | | ||||| |||||
Sbjct 160 GTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAACCCGGCGG 101
Query 36969 TCACCTGCTCGCGTTCGGCGGCTCCCGCACCTGGCACCGGCTGGCGGCGGCGATCGAGGA 37028
|| || ||||| |||||||| | ||||||| ||||| || || || | ||||||||
Sbjct 100 GCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGAATCGAGGA 41
Query 37029 CGCGGGCTTCGAGGTTCGCGACTCGATCGCGTGGCTGTAC 37068
||| || |||||| | |||||||||||||||||||| |||
Sbjct 40 CGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1
Score = 96.9 bits (106), Expect = 9e-16
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 36637 ATGAACCACCCGTACTACCAAGACGATCAGGTGACGCTCTACCACGGCGACTGCCTGCAC 36696
|||| | |||| ||||| ||| || | ||||||||||| |||||||||||| ||
Sbjct 324 ATGATCGCCCCGCACTACTCCACCGAGCACGCGACGCTCTACCTCGGCGACTGCCTCGAC 265
Query 36697 GTGCTCGCCGAGCTGCCCGATCGCAGCGTCGACGCCGTGGTTTGCGACCCGCCCTACGGG 36756
|| ||| |||||||||| ||||||| ||||||| || ||| ||||||||||
Sbjct 264 GTCCTCCGGAAGCTGCCCGACGGCAGCGTGCACGCCGTCGTCACCGATCCGCCCTACGCC 205
Query 36757 CTGGAGTTCATGGGCAAGGAGTGGGA 36782
|| || ||||||||| | | |||||
Sbjct 204 CTCGACTTCATGGGCCACGGCTGGGA 179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135327379687626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |