Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_031252.1
Length=51290
Score E
Sequences producing significant alignments: (Bits) Value
seq115307 159 1e-34
>seq115307
Length=544
Score = 159 bits (176), Expect = 1e-34
Identities = 160/208 (77%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 30898 ATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGG 30957
||||| |||||||| ||||| ||||||| ||||| |||||||| || || || ||
Sbjct 208 ATGGCGGGTGAAACCGTCATCACGCTGATCGGGAACCTCACGAACGACCCCGAACTGCGC 149
Query 30958 TTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTC 31017
||||| ||||| || ||| || || ||||||||| |||| || || || ||||||
Sbjct 148 TTCACCCCGTCGGGTGCCGCGGTGGCCAACTTCACGGTCGCCTCGACTCCCCGCACGTTC 89
Query 31018 GATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGCTGCTGTCTGG 31077
|| || ||||| ||||||||||| |||||||||||||| ||| |||| || |||||
Sbjct 88 GACCGTCAGTCGAACGAGTGGAAGGACGGCGAGACGCTGTTCATGCGTTGCGCGATCTGG 29
Query 31078 CGCGAGACTGCAGAGAATGTCGCAGAGT 31105
||||| | || ||||| ||||| ||||
Sbjct 28 CGCGAAGCGGCGGAGAACGTCGCCGAGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163746225269736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |