Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031255.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq83344 84.2 7e-12 >seq83344 Length=962 Score = 84.2 bits (92), Expect = 7e-12 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 39628 CTGCTCGTCGACGCGGCCCGCCTGGTCATCGAGACACAGTTCGCGTCCGGGTCGATGCTG 39687 ||||| ||| |||| | | |||| || ||| ||||||| || ||||||||| Sbjct 317 CTGCTGCTCGCGGCGGTCGAGCAGGTCGTCACGACCCAGTTCGGCTCGACCTCGATGCTG 376 Query 39688 CAGCGCAAGCTCCACATCGGCTACGCGCGCGCCGGCCGTCTGCTCGACGAGCTCGAGGCG 39747 ||||||||||||| | |||| | |||| |||||||| ||| | ||| | | ||| || Sbjct 377 CAGCGCAAGCTCCGCGTCGGGTTCGCGAAGGCCGGCCGGCTGATGGACCTGATGGAGTCG 436 Query 39748 CTCGACATCGTCGGCCCCGCGCAGGGCAGCAAGGCCCGCGAGGTCCTCG 39796 | | ||||| ||||| | ||||| ||||| ||||| || |||| Sbjct 437 CGGAAGATCGTGGGCCCGTCCGAGGGCTCGAAGGCGCGCGACGTGCTCG 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149704535968626