Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031261.1 Length=48670 Score E Sequences producing significant alignments: (Bits) Value seq81249 136 1e-27 >seq81249 Length=1001 Score = 136 bits (150), Expect = 1e-27 Identities = 126/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 38691 GTTTCAGCAGTGGTGCACACAGTGGGCAGCCGAGTGCTTGCGCGTGTTGAAACCGGGCGG 38750 ||| ||||| |||||| |||||||| ||||||||| | ||| | | ||||| ||||| Sbjct 160 GTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAACCCGGCGG 101 Query 38751 TCACATGTTGGCGTTCGGCGGTTCGCGCACGTGGCACCGGCTGGCGGCGGCGATCGAGGA 38810 || | | || ||||||||| | ||||| | ||||| || || || | |||||||| Sbjct 100 GCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGAATCGAGGA 41 Query 38811 CGCCGGGTTCGAGGTCCGCGACTCGATCGCGTGGCTGTAC 38850 |||||| |||||| |||||||||||||||||||||| ||| Sbjct 40 CGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155375525390576