Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq72241 134 1e-26 seq65811 125 6e-24 seq42370 122 8e-23 seq73807 109 5e-19 seq71687 102 7e-17 seq53817 102 7e-17 seq67817 95.1 1e-14 seq35021 86.0 5e-12 >seq72241 Length=55963 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | ||| | || | |||| |||||||| || || || || |||||| Sbjct 40630 TACCACCGCGGAGTCTGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCGG 40689 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || |||||||| ||||| || ||| |||| || |||||||||||||||| Sbjct 40690 CGAGGGTTCGGCCGTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAG 40749 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| ||| || || || | |||| || || | |||||||| Sbjct 40750 GGATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTATCGGAGCTCTCGA 40809 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || ||||| || ||||| || || |||||||| Sbjct 40810 CCTCAAGGGTAATTGTCTTACCGGTTAGGGTTTTCACGAAGATCTGCAT 40858 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583 ||||| || | || | ||||| || ||||| || ||||||||| | ||| | Sbjct 40416 CTCAAGACGAGATGAAGAGTAGATTCCTTTTGGATATTGTAATCGGCGAGAGTCCTGCCG 40475 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| | ||| || || ||| |||| || | ||||||||| ||||| || |||||||| Sbjct 40476 TCCTCCAACTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTA 40535 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||| || || || | || | || || | ||||| || || | || | | Sbjct 40536 TCCTGAATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCAACTTCAAGAGTAATC 40595 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||||||||||||||| ||||| |||||||| Sbjct 40596 GTCTTGCCGGTCAGAGTTTTAACAAATATCTGCAT 40630 Score = 100 bits (110), Expect = 2e-16 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||||| || | || | || ||||| || ||||| |||||||| | Sbjct 40174 TACCCCCTCGAAGCCTCAAGACAAGATGTAGGGTTGACTCCTTCTGAATATTGTAATC-C 40232 Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626 || || | | || || || ||||| || || ||| | || || ||||||||||| | Sbjct 40233 GCA-AGGGTTC-TACCGTCTTCCAGCTGCTTCCCGGCGAAAATTAGGCGCTGCTGATCAG 40290 Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686 |||| || || ||||| ||| ||| ||| ||||| | || | || || | || | Sbjct 40291 GAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACGTTGTCAATAGTATCAGAACTTT 40350 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| | || | |||||||| || |||||||| |||||||| ||||| Sbjct 40351 CCACCTCAAGAGTGATGGTTTTGCCTGTTAGAGTTTTGACAAAAATTTGCAT 40402 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTAT 118584 |||||||| || | || ||||| ||||||||||| ||||| ||| | ||| || | Sbjct 39962 CAACACCAGATGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCT-AGAGTACGACCGT 40020 Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 | || | ||| || || || |||| || | || ||||| ||||| || || || || | Sbjct 40021 CTTCCAACTGCTTCCCGGCAAAGATCAGTCTTTGTTGATCCGGAGGAATCCCTTCTTTAT 40080 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | ||| ||| || || | |||| ||| || | || || ||||| | || | | Sbjct 40081 CCTGAATCTTTGCCTTGACATTATCGATGGTATCAGAACTTTCAACCTCAAGAGTAATAG 40140 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || |||||||||||||| Sbjct 40141 TTTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 40174 >seq65811 Length=66007 Score = 125 bits (138), Expect = 6e-24 Identities = 158/213 (74%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAG----TGCGCGTATC 118585 |||||||||| |||||||| ||||||||||||||||| | || | ||| ||| | Sbjct 55255 ACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATC-CGCAAGGGTTCTGC-CGT--C 55310 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| ||||| || |||| || | ||||| || ||||| || |||||||| || Sbjct 55311 CTCGAGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGAGGAATTCCCTCCTTATC 55370 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || ||| || || | |||| |||||| | ||||||||| |||| || | || Sbjct 55371 CTGGATCTTTGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGT 55430 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| || || || |||||||| Sbjct 55431 CTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 55463 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | | ||||||||| | || || || |||||||| ||||| ||| Sbjct 55007 TACCTCCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGG 55066 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||||||||||| || || ||| |||| | | ||||| || || | Sbjct 55067 CCAAGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTG 55126 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||||||| |||||| || || | |||| |||||| | |||||| | Sbjct 55127 GAATGCCTTCCTTGTCTTGAATTTTAGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCAA 55186 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| || | || || ||||||| || || ||||| || ||||| Sbjct 55187 CTTCGAGCGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || || || || ||||||||||| || || ||||| || || Sbjct 54798 CACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCCAAGGTGCGGCCGTCTTC 54857 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| ||||| || |||| | | |||||| || || || || |||||||||||| Sbjct 54858 AAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTG 54917 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || ||| || | || | |||||| | |||||| ||||| | ||| | ||||| Sbjct 54918 AATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTTTT 54977 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || ||||| || ||||| Sbjct 54978 TCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007 Score = 105 bits (116), Expect = 6e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||| ||||| || || || ||||| || || ||| | ||| || | Sbjct 54373 CAAGATGGAGTGTTGACTCCTTCTGGATATTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 54432 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || ||||| |||| | | |||||| || || || || |||||||||||| | Sbjct 54433 GCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGA 54492 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 ||||| || || | || | |||||| | |||||| ||||| | ||| | || || | Sbjct 54493 TTTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAGGGTGATAGTCTTAC 54552 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || ||||| |||||||| Sbjct 54553 CGGTCAAGGTCTTCACAAAGATCTGCAT 54580 >seq42370 Length=41228 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | ||||| || | || | || ||||| || || ||||||||||| | Sbjct 10432 CCACCGCGAAGCCTCAAGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 10373 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | |||||| | ||| ||||| || |||| || ||||||||||| ||||| Sbjct 10372 AAGGTTCTACCATCCTCCAACTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGA 10313 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||| ||| ||| || ||||| | || | || || | ||||||||| Sbjct 10312 ATCCCCTCCTTATCTTGAATCTTCGCCTTAACGTTATCAATTGTATCAGAACTCTCGACC 10253 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | ||| || || ||||||||||| ||||| || ||||| Sbjct 10252 TCCAAGGTAATCGTCTTACCAGTCAGAGTTTTAACAAAGATTTGCAT 10206 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | ||||| || | || | || |||||||||||||| ||||||||| Sbjct 10204 CCACCGCGAAGCCTCAAGACGAGATGAAGGGTCGACTCTTTTTGAATATTGTAATCGGCA 10145 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || |||||| | || || ||||| ||||||| | ||||| || ||||| Sbjct 10144 AGAGTCCGGCCATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGAGGG 10085 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||| || |||||| || || | || | ||||| | ||||| ||| Sbjct 10084 ATCCCTTCCTTATCCTGAATTTTAGCCTTGACGTTGTCAATAGTGTCGGAACTCTCAACC 10025 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | ||| || ||||| || ||||| ||||| |||||||| Sbjct 10024 TCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTAACAAATATCTGCAT 9978 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || || || ||||| |||||||| || ||| || |||||||||||| Sbjct 10865 GTGGAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTACGTCCATCCTCGAGCTG 10806 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| ||||||| | ||||||||| || || || |||||||| || || || Sbjct 10805 CTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTATCCTGGATCTT 10746 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||| || | |||||| ||||| | || | ||||| || || Sbjct 10745 GGCCTTCACATTATCTATGGTATCTGAGCTCTCAACCTCCAGAGTAATAGTTTTCCCTGT 10686 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||| Sbjct 10685 CAATGTCTTGACAAATATCTGCAT 10662 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || ||||| |||||| | || || ||||| | ||||| || Sbjct 9946 GTTGATTCCTTCTGTATGTTATAATCGGCTAGGGTTCGGCCGTCCTCCAATTGTTTGCCG 9887 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || ||||||||||| ||||| || |||||||| ||| || || || Sbjct 9886 GCGAAGATAAGGCGCTGCTGATCCGGAGGGATACCCTCCTTATCTTGGATCTTAGCCTTG 9827 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | || || | ||||| ||||||| || | || ||||| || || ||| Sbjct 9826 ACATTATCAATAGTATCGGAACTCTCAACCTCGAGAGTTATGGTCTTGCCTGTTAGGGTT 9767 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 9766 TTCACGAAGATCTGCAT 9750 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTAT 118584 || ||||| || | || ||||| ||||||||||| ||||| ||| | ||| | || Sbjct 10646 CAGCACCAGATGAAGGGTGGACTCCTTTTGAATGTTATAATCAGCT-AGAGTTCTGCCAT 10588 Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 | || | ||| || || || |||| | | |||||| || ||||| || || ||||| | Sbjct 10587 CTTCCAACTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGAATCCCTTCCTTAT 10528 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | ||| ||| ||||| | || | || || | || || ||||| | || | | Sbjct 10527 CCTGAATCTTTGCCTTAACATTATCAATTGTATCAGAACTTTCAACCTCAAGAGTAATGG 10468 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || |||||||||||||| Sbjct 10467 TTTTACCAGTGAGGGTCTTAACAAAAATCTGCAT 10434 >seq73807 Length=69832 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | |||||| || | ||| | ||| ||||| ||||| || ||||| || | Sbjct 39156 CCACCACGGAGTCTCAAGACAAGGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCTGCC 39215 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || |||||| || ||||| || || | || | || ||||| || || || Sbjct 39216 AGGGTACGGCCATCCTCAAGTTGTTTCCCTGCAAAAATCAAGCGTTGCTGGTCTGGGGGA 39275 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||||||||| |||||| |||||| | || | ||||| | ||| || || Sbjct 39276 ATTCCCTCCTTGTCCTGAATTTTGGCTTTAACGTTGTCAATTGTGTCTGAGCTTTCAACT 39335 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | || || || |||||||| || ||||| ||||||||| Sbjct 39336 TCAAGGGTAATGGTCTTTCCTGTCAGAGTCTTGACAAAGATCTGCATG 39383 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | || | ||||||||| || | || ||||| ||||| ||||| ||||| Sbjct 38928 CCTCCCCTCAAACGCAACACCAAATGCAGAGTTGACTCCTTTTGGATGTTATAATCAGCA 38987 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | |||||| |||||||| || || | || ||||||||||| || || || Sbjct 38988 AGTGTCCTACCATCCTCAAGCTGTTTACCGGCAAATATCAGACGCTGCTGGTCAGGGGGA 39047 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| || |||||| ||| || ||||| | || | || || | ||| || || Sbjct 39048 ATGCCTTCTTTGTCTTGAATCTTAGCCTTAACGTTATCAATCGTATCAGAGCTTTCTACT 39107 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| || || || || || ||||| || ||||| |||||||| Sbjct 39108 TCTAGGGTAACGGTCTTCCCAGTAAGAGTCTTGACAAAGATCTGCAT 39154 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | || ||| || | ||| | || ||||| |||||||| ||||| || Sbjct 39384 CCACCACGGAGTCGCAAAACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCTGCA 39443 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || |||||| |||||||| ||||| | || | ||| |||||||| || || Sbjct 39444 AGGGTACGGCCATCCTCAAGCTGTTTCCCAGCAAAAATCAAACGTTGCTGATCAGGGGGA 39503 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||||||||| |||||| ||| || | || | ||||| | ||| ||||| Sbjct 39504 ATTCCCTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCGACT 39563 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | || || || ||||| || || || || || |||||| Sbjct 39564 TCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACGAAGATTTGCATG 39611 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || || || || || | || | ||||||| Sbjct 38718 ACCAAGTGCAGGGTGGACTCCTTCTGGATATTATAGTCCGCAAGGGTCCTGCCATCCTCG 38777 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || | ||| ||||| ||||| || || |||||||| | Sbjct 38778 AGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGA 38837 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 |||||| ||| || | || | || || | |||||| ||||| | || | || || Sbjct 38838 ATTTTTGCTTTCACATTATCAATAGTATCTGAGCTCTCCACCTCCAAAGTGATTGTCTTC 38897 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || || || ||||| |||||| || Sbjct 38898 CCTGTAAGTGTCTTCACGAAAATTTGCATGCCT 38930 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | |||||| || | |||| || ||||| ||||| |||||||| || Sbjct 39612 CCACCACGAAGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCA 39671 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || |||||| || ||||| || ||| | || | | ||||| || || || Sbjct 39672 AGGGTACGGCCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGA 39731 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||||||||| ||||| ||| || | || | ||||| | ||| || || Sbjct 39732 ATTCCCTCCTTGTCCTGGATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACT 39791 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | || || || ||||| || || ||||| || |||||| Sbjct 39792 TCAAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCATG 39839 >seq71687 Length=64904 Score = 102 bits (112), Expect = 7e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCT 118570 || ||||| || | | |||| ||| | ||| ||||| || || ||||||||||| ||| Sbjct 44686 CCACCGCGCAAGCGAAGGACCAGGTGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGCT 44745 Query 118571 CATAGTGC-GCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || | || | ||||||||||| || || || ||||||| | ||||||||| || | Sbjct 44746 AAG-GTCCTGCCT-TCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGTG 44803 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||| ||| || || || || | || | ||| || | | || | Sbjct 44804 GGATGCCTTCCTTATCTTGGATCTTCGCCTTCACATTGTCAATGGTATCGGAGGATTCAA 44863 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || || || ||||| ||||| || || |||||||| Sbjct 44864 CCTCGAGGGTAATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCAT 44912 >seq53817 Length=15024 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 || || || || || |||||||| || ||| | ||| | || |||||||| || || Sbjct 3660 GTGGATTCCTTCTGGATGTTGTAGTCAGCT-AGAGTTCTGCCGTCTTCGAGCTGCTTACC 3718 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 ||| |||||||||||||||| || || || |||||||||||||| |||||| || Sbjct 3719 GGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGAATTTTGGCCTT 3778 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | || | ||| |||| | |||||||| | ||| | || || || || || || Sbjct 3779 GACATTGTCAATGGTATCCGAGGATTCGACCTCAAGGGTGATGGTCTTCCCCGTGAGGGT 3838 Query 118721 TTTTACAAAAATCTGCAT 118738 ||| || || |||||||| Sbjct 3839 TTTCACGAAGATCTGCAT 3856 >seq67817 Length=4127 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGC-GTA-TCCTCGAG 118591 ||| || || || || || || |||||||| || ||| |||| | ||| || ||||| Sbjct 1410 GTGAATGGTGGATTCCTTCTGGATGTTGTAGTCAGCT---AGTGTTCTGTAGTCTTCGAG 1466 Query 118592 CTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAAT 118651 || || || ||| |||||||||||||||| || || || |||||||||||||| | ||| Sbjct 1467 TTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCGAAAT 1526 Query 118652 TTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCC 118711 ||| || || | || | ||| | | | |||||||| | ||| | || || || Sbjct 1527 TTTGGCCTTGACATTGTCAATGGTATTGGAGGATTCGACCTCAAGGGTGATGGTCTTCCC 1586 Query 118712 GGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || |||| ||| Sbjct 1587 CGTGAGGGTTTTCACGAAGATCTACAT 1613 >seq35021 Length=73443 Score = 86.0 bits (94), Expect = 5e-12 Identities = 122/171 (71%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 44849 TTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTT 44908 || |||||||| | ||||| ||||| |||||||||| | || || |||||||||||| Sbjct 66211 TTTGCCGAACGTATAGTCGCCTTCGCTTGTGTCGAAGGAATATTTTTCTCGGGGAGTTTT 66152 Query 44909 GCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAA 44968 |||||||||| | || | || | ||||||||||| || || ||||| Sbjct 66151 TGCGCGATATTTTGGTTAAAGAAACGTGGCCTTATGCCCGGACTAACCTTCTCGAACGAG 66092 Query 44969 TTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGC---CTCTAC 45016 || || || ||||||||||||| ||| | | || || ||| |||||| Sbjct 66091 TTAATCTCCCGAGACGAAGGTCTCCACTGCGATTTCGCTTGCTTACTCTAC 66041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433411105900984