Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq71887 91.5 1e-13 >seq71887 Length=39014 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 20434 TTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 ||||| ||||| || || || || || || |||||||| || || ||||| ||||| Sbjct 15450 TTTTATGTTGCGAACGGAGAGTTATCTTGCCAGATGTATCAGCGTTCAGCTGACATGGGT 15391 Query 20494 CTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 || || || || ||||| |||||| |||||| || |||||| ||||||||||||||| Sbjct 15390 CTTGGAGTCCCATTCAACATTGCATCTTATGCCCTCTTTACGTGCATGATTGCACATGTT 15331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398798191408390