Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq39070 104 2e-17
>seq39070
Length=11651
Score = 104 bits (114), Expect = 2e-17
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715
||| || ||||| |||||||| ||||| ||||||| | ||| | ||||| || || ||
Sbjct 7938 TAAGCAGGCAAAGTCACAATGGAGGCCTTCATCTCGAGAAATTAACTCGTTCGAGAAGGT 7879
Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775
|||||| ||||| | || ||||| |||| ||||||||| ||| || || || ||
Sbjct 7878 TAATCCGGGCATAAGCCCCCGTTTCTTTAGCCAAAATATCGCACAAAAACTCCCCGAGAA 7819
Query 13776 GAATATTCCCTCAACTGCAGCAAACGC 13802
|||||||||||||| |||||| ||
Sbjct 7818 AAATATTCCCTCAACACAAGCAAAGGC 7792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478114386887280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |