Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq73807 149 5e-31
seq65811 136 3e-27
seq72241 134 1e-26
seq42370 122 7e-23
seq71687 113 4e-20
seq53817 113 4e-20
seq67817 102 7e-17
>seq73807
Length=69832
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || | || || || || |||| || ||||| |||| | |
Sbjct 39610 ATGCAAATCTTCGTTAAGACCCTGACAGGAAAGACCATCACCCTGGAAGTCGAAAGCTCA 39551
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| |||||||| ||||||||||| ||||| || |||||
Sbjct 39550 GACACAATTGACAATGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGATCAG 39491
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || |||||| | |||||| ||| ||| | | || |||||
Sbjct 39490 CAACGTTTGATTTTTGCTGGGAAACAGCTTGAGGATGGCCGTACCCTTGCAGACTACAAT 39431
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| || |||||| | || | ||||||||| | || || ||
Sbjct 39430 ATTCAAAAGGAGTCCACCCTTCACCTTGTTTTGCGACTCCGTGGTGG 39384
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| |||||||| || | || || || || |||| |||||||| |||| | |
Sbjct 39838 ATGCAAATCTTTGTTAAGACCCTGACAGGAAAGACCATCACCCTTGAAGTTGAAAGCTCA 39779
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| ||||| || ||||||||||| ||||| || || ||
Sbjct 39778 GACACAATTGACAATGTCAAAGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 39719
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || ||||| | |||||| ||| ||| | | || ||||||
Sbjct 39718 CAAAGATTGATTTTCGCAGGGAAACAACTGGAGGATGGCCGTACCCTTGCAGACTACAAC 39659
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| ||||| || |||||| | ||| | || ||| || | || || ||
Sbjct 39658 ATACAAAAGGAGTCCACCCTCCATCTTGTCTTGAGACTTCGTGGTGG 39612
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || ||||| || ||| | || || || || || || || ||||| |||| | |
Sbjct 39155 GATGCAGATCTTTGTCAAGACTCTTACTGGGAAGACCGTTACCCTAGAAGTAGAAAGCTC 39096
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || | | || || ||||||||||| || || ||||| || || ||
Sbjct 39095 TGATACGATTGATAACGTTAAGGCTAAGATTCAAGACAAAGAAGGCATTCCCCCTGACCA 39036
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| ||||| ||||||||||| |||||| | |||||| | || | | ||||| ||
Sbjct 39035 GCAGCGTCTGATATTTGCCGGTAAACAGCTTGAGGATGGTAGGACACTTGCTGATTATAA 38976
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||| ||||| || || || | ||||| || ||||| ||| | |||||
Sbjct 38975 CATCCAAAAGGAGTCAACTCTGCATTTGGTGTTGCGTTTGAGGGGAGG 38928
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || |||||||| || | || || || || | ||||| ||||| || |
Sbjct 40068 AGATGCAGATCTTTGTTAAGACCCTCACTGGCAAGACAATAACTCTCGAAGTAGAGAGTT 40009
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | || || ||||| |||||||||||||||||| || ||||| || ||||
Sbjct 40008 CTGACACTATTGATAATGTCAAAGCAAAAATTCAAGACAAGGAAGGAATTCCCCCTGATC 39949
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | | || ||||| |||||||| | |||||| || ||| | | ||||| |
Sbjct 39948 AGCAGAGATTGATCTTTGCTGGCAAACAACTGGAGGATGGTCGTACCCTTGCAGATTATA 39889
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|||| ||||| || |||||| | ||| | || |||
Sbjct 39888 ACATACAAAAGGAGTCCACCCTCCATCTTGTCTTG 39854
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || || || || ||||| | || ||||| | | |
Sbjct 38926 ATGCAAATTTTCGTGAAGACACTTACAGGGAAGACAATCACTTTGGAGGTGGAGAGCTCA 38867
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| ||||||||| |||||||| || ||||| || ||||||
Sbjct 38866 GATACTATTGATAATGTGAAAGCAAAAATTCAGGACAAGGAAGGAATTCCTCCAGATCAA 38807
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| ||||| ||| | |||||| | | ||| | | || || ||
Sbjct 38806 CAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCGGACTATAAT 38747
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | || || ||| | || | || |||||
Sbjct 38746 ATCCAGAAGGAGTCCACCCTGCACTTGGTTCTTCGTCTTCGTGGAGG 38700
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || | || |||||||| |||| | |
Sbjct 39382 ATGCAGATCTTTGTCAAGACTCTGACAGGAAAGACCATTACCCTTGAAGTTGAAAGCTCA 39323
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | ||| |||||||| ||||||||||| ||||| || || ||
Sbjct 39322 GACACAATTGACAACGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCAGACCAG 39263
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || ||||| || ||||| | |||||| ||| ||| | | || |||||
Sbjct 39262 CAACGCTTGATTTTTGCAGGGAAACAACTTGAGGATGGCCGTACCCTGGCAGACTACAAT 39203
Query 22399 ATTCAAAAAGAATCCAC 22415
|| ||||| || |||||
Sbjct 39202 ATCCAAAAGGAGTCCAC 39186
>seq65811
Length=66007
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || || ||||| || || |||| || ||||| || | | ||
Sbjct 55235 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACGCTCGAAGTTGAGAGCTCC 55176
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || ||||||||||||||||| || |||||||| || ||
Sbjct 55175 GACACCATCGACAACGTAAAGGCTAAAATTCAAGACAAGGAAGGCATTCCACCAGACCAG 55116
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || ||| | ||||| ||||||| | |||| |||||
Sbjct 55115 CAAAGATTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAAT 55056
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||||||| | || || || | || | || ||||||
Sbjct 55055 ATTCAAAAGGAATCCACCCTTCACTTGGTGCTTCGTCTCCGTGGAGGT 55008
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | ||||| ||||| |||| || || || || | | ||
Sbjct 55007 ATGCAAATCTTTGTCAAGACTCTCACCGGAAAAACCATCACCCTGGAGGTTGAGAGCTCC 54948
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | ||| || |||||||||||||||||||||||||| || ||
Sbjct 54947 GACACCATTGACAACGTGAAAGCCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 54888
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| | || || ||||||| | | || ||||||
Sbjct 54887 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGCACCTTGGCGGACTACAAC 54828
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| || ||||||||| | || || ||
Sbjct 54827 ATTCAGAAGGAATCCACCCTTCACTTGGT 54799
Score = 127 bits (140), Expect = 2e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273
|| ||||||| || || ||||| ||| | ||||| || || ||||||| ||||| || |
Sbjct 55468 TACAGATGCAGATCTTCGTTAAGACTCTTACCGGAAAGACCATCACTCTCGAAGTCGAGA 55409
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
| |||| ||| | || | |||| ||| || || || |||||||| ||||| || |
Sbjct 55408 GCTCCGACACCATCGATAACGTCAAGGCAAAGATCCAGGATAAGGAGGGAATTCCTCCAG 55349
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
| || ||| | || || |||||||| || ||| | ||||| | | ||| | | ||||
Sbjct 55348 ACCAGCAAAGGCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCGGATT 55289
Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||| || || ||| | || || || | || ||| | ||||||
Sbjct 55288 ACAACATTCAAAAGGAGTCTACCCTCCACTTGGTCCTCCGTTTGAGGGGAGGT 55236
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || |||||||| || |||| || || ||||| | | |
Sbjct 54580 ATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACTATCACCCTGGAGGTGGAGAGCTCT 54521
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || |||||| |||||||||||||| |||||||| || ||
Sbjct 54520 GACACCATTGACAATGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAG 54461
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374
|| | | || ||||| || || ||| | || |||
Sbjct 54460 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGAT 54425
>seq72241
Length=55963
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||||||||| || || || ||||| |||||||||| || | || ||||| || || |
Sbjct 40862 AAAGATGCAGATCTTCGTGAAAACCCTAACCGGTAAGACAATTACCCTTGAGGTCGAGAG 40803
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| ||||||| | ||| || |||| || ||||||||||||||||| || || |||||
Sbjct 40802 CTCCGATACAATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGAATCCCTCCCGA 40743
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| || || || || || ||||||||||| | ||||| ||| ||| || |||||||
Sbjct 40742 TCAGCAGCGCCTAATCTTCGCCGGCAAACAACTCGAGGACGGCCGAACCCTCGCCGATTA 40683
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || || | ||| | || | || | ||||| |||
Sbjct 40682 TAATATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCAGACTCCGCGGTGGT 40631
Score = 132 bits (146), Expect = 4e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||||||| | ||||| || ||| | ||||||||||| || | ||
Sbjct 40630 ATGCAGATATTTGTTAAAACTCTGACCGGCAAGACGATTACTCTTGAAGTTGAGAGTTCC 40571
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| || ||||| || |||||||| ||||| || |||||
Sbjct 40570 GATACAATTGACAACGTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCTCCGGATCAG 40511
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| || ||||| || ||||| ||||| | | || || ||||||||||
Sbjct 40510 CAGAGGCTTATCTTCGCCGGGAAGCAGTTGGAGGACGGCAGGACTCTCGCCGATTACAAT 40451
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
|| ||||| ||||| || | ||| | || |||
Sbjct 40450 ATCCAAAAGGAATCTACTCTTCATCTCGTCTTG 40418
Score = 129 bits (142), Expect = 5e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||||||||| |||||| |||| || ||||| |||||||||| ||||||| |
Sbjct 40403 GATGCAAATTTTTGTCAAAACTCTAACAGGCAAAACCATCACTCTTGAGGTGGAAAGTTC 40344
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | ||| | | || ||| |||||||| ||||| || ||||| || |||||
Sbjct 40343 TGATACTATTGACAACGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCA 40284
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| || || || || ||||| || ||| | || || | ||| | | ||||||||
Sbjct 40283 GCAGCGCCTAATTTTCGCCGGGAAGCAGCTGGAAGACGGTAGAACCCTTGCGGATTACAA 40224
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
||||| || || || ||| ||||| | || |||
Sbjct 40223 TATTCAGAAGGAGTCAACCCTACATCTTGTCTTG 40190
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || || | || |||||||| | |||||||| || |||| |
Sbjct 40174 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAAACTATTACTCTTGAGGTTGAAAGTTCT 40115
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || |||| ||| ||||| || || || || ||||| || ||||||
Sbjct 40114 GATACCATCGATAATGTCAAGGCAAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCAA 40055
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || |||||||| || ||||| || || || || | | ||||| |||
Sbjct 40054 CAAAGACTGATCTTTGCCGGGAAGCAGTTGGAAGACGGTCGTACTCTAGCTGATTATAAC 39995
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | ||| | || ||||| || | || |||
Sbjct 39994 ATTCAAAAGGAGTCCACTCTTCATCTGGTGTTGCGTCTGAGGGGTGGT 39947
>seq42370
Length=41228
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||||||||| ||||||| || ||| | ||||| || || || | ||
Sbjct 9978 ATGCAGATATTTGTTAAAACCCTAACCGGAAAGACGATTACTCTCGAGGTTGAGAGTTCC 10037
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| |||||||| || ||||| || || || || || ||
Sbjct 10038 GACACTATTGACAACGTCAAGGCTAAAATTCAGGATAAGGAAGGGATCCCTCCGGACCAG 10097
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || ||||| || || || || |||||| ||| || | ||||||||||
Sbjct 10098 CAAAGGCTCATCTTTGCTGGGAAGCAATTGGAGGATGGCCGGACTCTTGCCGATTACAAT 10157
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||||||||| || ||| | ||| | || ||| | | ||||| ||
Sbjct 10158 ATTCAAAAAGAGTCGACCCTTCATCTCGTCTTGAGGCTTCGCGGTGG 10204
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| |||| || || || | ||||| || || || | ||
Sbjct 9750 ATGCAGATCTTCGTGAAAACCCTAACAGGCAAGACCATAACTCTCGAGGTTGAGAGTTCC 9809
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || |||| || || ||||| ||||||||||| || || |||||
Sbjct 9810 GATACTATTGATAATGTCAAGGCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGATCAG 9869
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || ||||||||||| || ||||| ||| ||| | ||||||| |||
Sbjct 9870 CAGCGCCTTATCTTCGCCGGCAAACAATTGGAGGACGGCCGAACCCTAGCCGATTATAAC 9929
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || ||||| ||| | ||| | ||| | || | || || |||
Sbjct 9930 ATACAGAAGGAATCAACCCTTCATCTTGTTCTTCGTCTCCGTGGTGGT 9977
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| |||||||||||| | || ||||| ||| | || | || || || | |
Sbjct 10205 GATGCAAATCTTTGTTAAAACTCTGACTGGTAAGACGATTACCTTGGAGGTCGAGAGTTC 10264
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || | | || || |||||||| |||||||| ||||| || |||||
Sbjct 10265 TGATACAATTGATAACGTTAAGGCGAAGATTCAAGATAAGGAGGGGATTCCTCCGGATCA 10324
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| || || || |||||||| || ||||| |||||| | ||| | | ||||||||
Sbjct 10325 GCAGCGCCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTAGAACCTTGGCTGATTACAA 10384
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||| || || || || || ||||| | || ||| | | ||||| ||
Sbjct 10385 CATCCAGAAGGAGTCGACTCTACATCTCGTCTTGAGGCTTCGCGGTGG 10432
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||||||||| || | || |||||||| | |||||||| || |||| |
Sbjct 10433 GATGCAGATTTTTGTTAAGACCCTCACTGGTAAAACCATTACTCTTGAGGTTGAAAGTTC 10492
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || | || ||| ||||| || ||||| || ||||| || || ||
Sbjct 10493 TGATACAATTGATAATGTTAAGGCAAAGATTCAGGATAAGGAAGGGATTCCTCCGGACCA 10552
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| || ||||| || ||| | | || | | ||||| ||
Sbjct 10553 GCAGAGATTGATCTTTGCCGGGAAGCAGTTGGAAGATGGCAGAACTCTAGCTGATTATAA 10612
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| || |||||| | ||| | || |||| || | || |||
Sbjct 10613 CATTCAAAAGGAGTCCACCCTTCATCTGGTGCTGCGTCTGAGAGGTGGT 10661
>seq71687
Length=64904
Score = 113 bits (124), Expect = 4e-20
Identities = 167/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268
||||| |||||||| || || || ||||| | || ||||| || | || || || ||
Sbjct 44922 ATTTGCGAAGATGCAGATCTTCGTGAAAACCCTGACGGGTAAGACCATTACCCTCGAGGT 44863
Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328
||| || |||||||| | ||| || | || || || ||||| ||||| || || ||
Sbjct 44862 TGAATCCTCCGATACCATTGACAATGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCC 44803
Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388
||| ||||| || | || || ||||||||||| ||| | ||||| | | ||| | |
Sbjct 44802 ACCGGATCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGAAGGCAGGACCTTAGC 44743
Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||||||||| || || || || || | || | || | || |||||||| ||
Sbjct 44742 GGATTACAACATCCAGAAGGAGTCGACACTGCACCTGGTCCTTCGCTTGCGCGGTGG 44686
>seq53817
Length=15024
Score = 113 bits (124), Expect = 4e-20
Identities = 146/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || || || ||||| | || || || || |||| ||||| || ||| |
Sbjct 3860 AAAAATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAATC 3801
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| | |||||| | ||| || |||| |||||||| ||||||||||| || ||||| ||
Sbjct 3800 CTCGGATACCATTGACAATGTCAAGGCCAAAATTCAGGACAAGGAGGGCATCCCACCGGA 3741
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| || ||||| || || ||||| || ||| | || || | | || | | || ||
Sbjct 3740 CCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGACGGCAGAACTCTAGCTGACTA 3681
Query 22395 CAACATTCAAAAAGAATCCACC 22416
|||||| || || |||||||||
Sbjct 3680 CAACATCCAGAAGGAATCCACC 3659
>seq67817
Length=4127
Score = 102 bits (112), Expect = 7e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||| | || || || ||||| | || || || || |||| ||||| || ||| ||
Sbjct 1616 AAAATGTAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAATCC 1557
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|| ||||| | ||| || |||| |||||| ||||||||||| || ||||| ||
Sbjct 1556 TCCAATACCATTGACAATGTCAAGGCCAAAATTTCGGACAAGGAGGGCATCCCACCAGAC 1497
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || ||||| || || | || || || | || | | || |||
Sbjct 1496 CAGCAGCGTCTCATCTTCGCCGGGAAGCAACTCGAAGACTACAGAACACTAGCTGACTAC 1437
Query 22396 AACATTCAAAAAGAATCCACCATACA 22421
||||| || || ||||||||||| ||
Sbjct 1436 AACATCCAGAAGGAATCCACCATTCA 1411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419322335773630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |