Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq65811 122 8e-23 seq42370 122 8e-23 seq73807 118 1e-21 seq72241 118 1e-21 >seq65811 Length=66007 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || || || |||||||||||||| ||| ||| ||||| || || Sbjct 55026 CACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGGCCAAGGTGCGGCCGTCCTC 55085 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| ||||||||| ||||| || || || ||||| |||||||| Sbjct 55086 GAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTG 55145 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||||| ||| | |||| |||| |||||| | ||||| ||||||| || | || | Sbjct 55146 AATTTTAGCCTTTACGTTG-TCGATGGTGTCGGAGCTCTCAACTTCGAGCGTGATGGTCT 55204 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||| || || ||||| || ||||| Sbjct 55205 TTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | |||||||| |||||||| |||||||| | | || | || || Sbjct 55255 ACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCCGCAAGGGTTCTGCCGTCCTCG 55314 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| ||||| || |||||| | ||||| || ||||| || |||||||| ||| | Sbjct 55315 AGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGAGGAATTCCCTCCTTATCCTGG 55374 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | |||| |||||| | ||||||||||||| || | || || Sbjct 55375 ATCTTTGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTCTTT 55434 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || || || |||||||| Sbjct 55435 CCGGTAAGAGTCTTAACGAAGATCTGCAT 55463 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || || || || ||||| ||||| || || Sbjct 54781 CCACCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCC 54840 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| ||||| || ||||||| | |||||| || || || Sbjct 54841 AAGGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGA 54900 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTT--GAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||||| | ||| | | |||| |||| || | |||||| | ||||| | Sbjct 54901 ATACCCTCCTTGT-CTTGAATCTTGGCTTTCACGTTG-TCAATGGTGTCGGAGCTCTCAA 54958 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | ||||| ||||| ||||| || ||||| || ||||| Sbjct 54959 CCTCCAGGGTGATGGTTTTTCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | || | ||| | || ||||| || || |||||||| || | Sbjct 54353 TCCACCACGGAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATATTGTAGTCAGC 54412 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || | ||| || ||||| || ||||| ||||||| | |||||| || || || Sbjct 54413 CAAAGTCCTTCCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGG 54472 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| |||||| ||| | | || | |||||| | ||||| || Sbjct 54473 AATTCCCTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCCAC 54532 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||||| || || ||||| |||||||| Sbjct 54533 CTCCAGGGTGATAGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 54580 >seq42370 Length=41228 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | | ||| || | ||||| || ||||| || || || |||||||| || Sbjct 10432 CCACCGCGAAGCCTCAAGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 10373 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || | ||| ||||| || |||||| ||||||||||| ||||| Sbjct 10372 AAGGTTCTACCATCCTCCAACTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGA 10313 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || || ||| ||| | | || | || || | ||||||||| Sbjct 10312 ATCCCCTCCTTATCTTGAATCTTCGCCTTAACGTTATCAATTGTATCAGAACTCTCGACC 10253 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| || || ||||||||||| ||||| || ||||| Sbjct 10252 TCCAAGGTAATCGTCTTACCAGTCAGAGTTTTAACAAAGATTTGCAT 10206 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | | ||| || | ||| | || |||||||||||||||||||||||| | Sbjct 10204 CCACCGCGAAGCCTCAAGACGAGATGAAGGGTCGACTCTTTTTGAATATTGTAATCGGCA 10145 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | || || ||||| |||| | | ||||| || ||||| Sbjct 10144 AGAGTCCGGCCATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGAGGG 10085 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| ||| ||||| ||||| |||| || | ||||| | |||||| || Sbjct 10084 ATCCCTTCCTTATCCTGAATTTTAGCCTTGACGTTG-TCAATAGTGTCGGAACTCTCAAC 10026 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| || ||||| || ||||| ||||| |||||||| Sbjct 10025 CTCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTAACAAATATCTGCAT 9978 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || |||||||||||||| ||| || || ||| || ||||| || ||| Sbjct 10858 GTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTACGTCCATCCTCGAGCTGCTTCCCA 10799 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||| || || || |||||||| ||| ||| || ||| Sbjct 10798 GCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTATCCTGGATCTTGGCCTTC 10739 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | ||||| || || | || | ||||| || |||| || Sbjct 10738 ACATTATCTATGGTATCTGAGCTCTCAACCTCCAGAGTAATAGTTTTCCCTGTCAATGTC 10679 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 10678 TTGACAAATATCTGCAT 10662 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||||| ||| | || ||||| |||||||| || ||||| | | || | | Sbjct 10648 CGCAGCACCAGATGAAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAGAGTTCTGCCA 10589 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | ||| || || || ||||||||| |||||| || ||||| || || ||||| Sbjct 10588 TCTTCCAACTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGAATCCCTTCCTTA 10529 Query 127019 TCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| | | ||| || | | || | || || | ||| || || || | || | Sbjct 10528 TCC-TGAATCTTTGCCTTAACATTATCAATTGTATCAGAACTTTCAACCTCAAGAGTAAT 10470 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || || || |||||||||||||| Sbjct 10469 GGTTTTACCAGTGAGGGTCTTAACAAAAATCTGCAT 10434 >seq73807 Length=69832 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||| || | || | || ||||| |||||||||||||| || | Sbjct 39384 CCACCACGGAGTCGCAAAACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCTGCA 39443 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| ||||| | ||||| || |||||||| || || Sbjct 39444 AGGGTACGGCCATCCTCAAGCTGTTTCCCAGCAAAAATCAAACGTTGCTGATCAGGGGGA 39503 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| || |||| | || | ||||| | || ||||| Sbjct 39504 ATTCCCTCCTTGTCC-TGAATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCGAC 39562 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | ||| | || || || ||||| || || || || || |||||| Sbjct 39563 TTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACGAAGATTTGCATG 39611 Score = 113 bits (124), Expect = 4e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || ||| || | || | || ||||| ||||| |||||||| || || Sbjct 39156 CCACCACGGAGTCTCAAGACAAGGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCTGCC 39215 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| || || | ||||| || ||||| || || || Sbjct 39216 AGGGTACGGCCATCCTCAAGTTGTTTCCCTGCAAAAATCAAGCGTTGCTGGTCTGGGGGA 39275 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||||||| ||| ||| |||| | |||| || | ||||| | || || | Sbjct 39276 ATTCCCTCCTTGTCC-TGAATTTTGGCTTTAACGTTG-TCAATTGTGTCTGAGCTTTCAA 39333 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| | ||| | || || || |||||||| || ||||| ||||||||| Sbjct 39334 CTTCAAGGGTAATGGTCTTTCCTGTCAGAGTCTTGACAAAGATCTGCATG 39383 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || ||| || | ||| | || ||||| ||||| || ||||| || | Sbjct 39612 CCACCACGAAGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCA 39671 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| || ||| | ||||||| ||||| || || || Sbjct 39672 AGGGTACGGCCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGA 39731 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| |||||| |||| | || | ||||| | || || ||| Sbjct 39732 ATTCCCTCCTTGTCCTGGATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACT 39791 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || || ||||| || || ||||| || |||||| Sbjct 39792 TCAAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCATG 39839 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||||||||||||| | || ||||| ||||| || || ||||| | | || | | Sbjct 38937 AAACGCAACACCAAATGCAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGTGTCCTA 38996 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || |||||||| || || | |||| |||||||| || || || ||||| || Sbjct 38997 CCATCCTCAAGCTGTTTACCGGCAAATATCAGACGCTGCTGGTCAGGGGGAATGCCTTCT 39056 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| || || ||| | | || | || || | || || ||||| | ||| Sbjct 39057 TTGTCTTGAATCTTAGCCTTAACGTTATCAATCGTATCAGAGCTTTCTACTTCTAGGGTA 39116 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| || ||||| |||||||| Sbjct 39117 ACGGTCTTCCCAGTAAGAGTCTTGACAAAGATCTGCAT 39154 >seq72241 Length=55963 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960 ||| || | ||| | ||||| || ||||| |||||||||||| | | || | || Sbjct 40418 CAAGACGAGATGAAGAGTAGATTCCTTTTGGATATTGTAATCGGCGAGAGTCCTGCCGTC 40477 Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || | ||| || || ||| |||| | | ||||||||| ||||| || |||||||| || Sbjct 40478 CTCCAACTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTATC 40537 Query 127021 CGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCG 127079 | || || ||||| |||| || | || || | |||||| ||||| | || | || Sbjct 40538 CTGAATCTTGGCCTTGACGTTG-TCAATTGTATCGGAACTCTCAACTTCAAGAGTAATCG 40596 Query 127080 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||||||||||||| ||||| |||||||| Sbjct 40597 TCTTGCCGGTCAGAGTTTTAACAAATATCTGCAT 40630 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | |||||||| || || ||||| |||||| | Sbjct 40632 CCACCGCGGAGTCTGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCG 40691 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || || ||||| || ||| |||| | ||||||||||||||||| Sbjct 40692 AGGGTTCGGCCGTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAGGG 40751 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | |||| || || | |||||||| Sbjct 40752 ATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTATCGGAGCTCTCGACC 40811 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||| || ||||| || || |||||||| Sbjct 40812 TCAAGGGTAATTGTCTTACCGGTTAGGGTTTTCACGAAGATCTGCAT 40858 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| ||| | || ||||| |||||||| || ||||| | | || ||| Sbjct 39960 CGCAACACCAGATGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCTAGAGTACGACCG 40019 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | ||| || || || |||||| || || ||||| ||||| || || || || Sbjct 40020 TCTTCCAACTGCTTCCCGGCAAAGATCAGTCTTTGTTGATCCGGAGGAATCCCTTCTTTA 40079 Query 127019 TCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| | | ||| |||| | |||| ||| || | ||| || || || | || | Sbjct 40080 TCC-TGAATCTTTGCCTTGACATTATCGATGGTATCAGAACTTTCAACCTCAAGAGTAAT 40138 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || || || |||||||||||||| Sbjct 40139 AGTTTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 40174 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960 ||| || | ||||| || ||||| || |||||||||||||| | | || | | || Sbjct 40190 CAAGACAAGATGTAGGGTTGACTCCTTCTGAATATTGTAATCCGCAAGGGTTCTACCGTC 40249 Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || ||||| || || ||| | || | ||||||||||| ||||| || || ||||| | Sbjct 40250 TTCCAGCTGCTTCCCGGCGAAAATTAGGCGCTGCTGATCAGGAGGAATTCCTTCCTTAT- 40308 Query 127021 CGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 | ||| | | ||| | | |||| || | || || | ||| || || || | || | Sbjct 40309 CTTGAATCTTTGCCTTAACGTTG-TCAATAGTATCAGAACTTTCCACCTCAAGAGTGATG 40367 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || |||||||| |||||||| ||||| Sbjct 40368 GTTTTGCCTGTTAGAGTTTTGACAAAAATTTGCAT 40402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || ||||||||||| ||| || || ||| || ||||| |||||| Sbjct 39750 GTGGACTCCTTCTGGATATTGTAATCAGCCAGAGTACGCCCATCTTCAAGCTGCTTTCCA 39809 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | | ||||||||| || || || ||||| |||||| || || ||| Sbjct 39810 GCGAATATAAGCCTCTGCTGATCCGGGGGAATTCCCTCTTTGTCCTGAATCTTGGTCTTC 39869 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | |||||| || || | || | ||| || || |||| || Sbjct 39870 ACATTATCTATGGTATCTGAACTCTCAACCTCTAACGTAATCGTCTTCCCAGTCAATGTC 39929 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 39930 TTCACAAATATCTGCAT 39946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475029447944480