Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq35021 113 8e-20
>seq35021
Length=73443
Score = 113 bits (124), Expect = 8e-20
Identities = 183/261 (70%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
|||||||| ||||| | |||||| || ||||| ||||| ||||| ||||| | ||| ||
Sbjct 66342 TACATCTCGGAGTGAATATTCTCGATGGCGATTTGGAAACCGTAAAAGGCACGGGCTTCG 66401
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543
| | ||| |||||| | ||||| || || |||||||| || || ||||| ||
Sbjct 66402 GAAATCTGAACTTCTTTCATGAATCGA-CCGGCGAGATTCTCCAAAACAATGCCATCAGA 66460
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
||| || |||||||| || || || | | ||| || ||||||| | | ||||| || |
Sbjct 66461 AGCGGCGAAGAAGGCGAGAACGTGAGTGATGAAGTGACGCTCGTCGGGAGTGAGGGCTTC 66520
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663
||| | | ||| | || || || || || | ||||||||||| || |||
Sbjct 66521 CCATTGACGGAGGTCCTGAGATAGATCGACCTCCTCGGCGGTCCAGAAGGAAGCCTCTGC 66580
Query 48664 TTTTTTGTACATGCCCCATAT 48684
|| |||||||| |||| ||
Sbjct 66581 CTTCTTGTACATCTCCCAAAT 66601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930609394823680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |