Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq35021 113 8e-20 >seq35021 Length=73443 Score = 113 bits (124), Expect = 8e-20 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||||||| ||||| | |||||| || ||||| ||||| ||||| ||||| | ||| || Sbjct 66342 TACATCTCGGAGTGAATATTCTCGATGGCGATTTGGAAACCGTAAAAGGCACGGGCTTCG 66401 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543 | | ||| |||||| | ||||| || || |||||||| || || ||||| || Sbjct 66402 GAAATCTGAACTTCTTTCATGAATCGA-CCGGCGAGATTCTCCAAAACAATGCCATCAGA 66460 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 ||| || |||||||| || || || | | ||| || ||||||| | | ||||| || | Sbjct 66461 AGCGGCGAAGAAGGCGAGAACGTGAGTGATGAAGTGACGCTCGTCGGGAGTGAGGGCTTC 66520 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 ||| | | ||| | || || || || || | ||||||||||| || ||| Sbjct 66521 CCATTGACGGAGGTCCTGAGATAGATCGACCTCCTCGGCGGTCCAGAAGGAAGCCTCTGC 66580 Query 48664 TTTTTTGTACATGCCCCATAT 48684 || |||||||| |||| || Sbjct 66581 CTTCTTGTACATCTCCCAAAT 66601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930609394823680