Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq69667 89.7 2e-13 seq61220 89.7 2e-13 >seq69667 Length=4426 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||| ||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 3127 GTTGCAGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 3186 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 3187 CTGCTCTACCCCGC 3200 >seq61220 Length=5248 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | |||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 1197 GTTGCGGAGACAAGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 1138 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 1137 CTGCTCTACCCCGC 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181432182223524