Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq73807 158 1e-33
seq65811 143 3e-29
seq72241 134 1e-26
seq53817 122 9e-23
seq42370 120 3e-22
seq64144 105 7e-18
seq67817 104 2e-17
seq25273 104 2e-17
seq55661 100 3e-16
>seq73807
Length=69832
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||||||||| || ||||| || ||||| ||||||||||| |||||||| ||
Sbjct 39384 CCACCACGGAGTCGCAAAACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCTGCA 39443
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || |||||||| || |||||||||||||| |||||||| || ||
Sbjct 39444 AGGGTACGGCCATCCTCAAGCTGTTTCCCAGCAAAAATCAAACGTTGCTGATCAGGGGGA 39503
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || |||||||| |||||| ||| | |||||| || ||| ||
Sbjct 39504 ATTCCCTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCGACT 39563
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || |||||||| ||||||||
Sbjct 39564 TCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACGAAGATTTGCAT 39610
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||||| ||| || ||||| || ||||| |||||||| || |||||||| |
Sbjct 39156 CCACCACGGAGTCTCAAGACAAGGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCTGCC 39215
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || || ||||| |||||||||||||| || ||||| || || ||
Sbjct 39216 AGGGTACGGCCATCCTCAAGTTGTTTCCCTGCAAAAATCAAGCGTTGCTGGTCTGGGGGA 39275
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || |||||||| ||| || ||| | |||||| || ||| ||
Sbjct 39276 ATTCCCTCCTTGTCCTGAATTTTGGCTTTAACGTTGTCAATTGTGTCTGAGCTTTCAACT 39335
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| || || || | ||| || || || || |||||
Sbjct 39336 TCAAGGGTAATGGTCTTTCCTGTCAGAGTCTTGACAAAGATCTGCAT 39382
Score = 123 bits (136), Expect = 3e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560
||| || || || || ||||| |||||||| ||||| || || ||| ||| || ||
Sbjct 39854 CAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTATAATCTGCAAGGGTACGACCATC 39913
Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620
|| || |||||||| ||||| ||||| | ||||||||| || || || ||||| || ||
Sbjct 39914 CTCCAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGGGGAATTCCTTCCTTGTC 39973
Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680
|||||||||| |||||| || | ||||| || || || |||||||| || ||
Sbjct 39974 TTGAATTTTTGCTTTGACATTATCAATAGTGTCAGAACTCTCTACTTCGAGAGTTATTGT 40033
Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || | || ||||| || || |||||
Sbjct 40034 CTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 40066
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||| ||| || || || || ||||| |||||||| ||||||||||| ||| ||| |
Sbjct 39621 AGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCAAGGGTACGG 39680
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || || ||||| ||||| |||||||| | ||||| || || || || || ||
Sbjct 39681 CCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGAATTCCCTCC 39740
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || ||||| |||||| ||| | |||||| || ||| || || || ||
Sbjct 39741 TTGTCCTGGATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACTTCAAGGGTG 39800
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || ||||| || ||||||||
Sbjct 39801 ATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCAT 39838
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| || | |||||||| | || || || || |||||||| ||||| || || ||
Sbjct 38928 CCTCCCCTCAAACGCAACACCAAATGCAGAGTTGACTCCTTTTGGATGTTATAATCAGCA 38987
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || |||||||| || ||||| |||| ||||||||| || || ||
Sbjct 38988 AGTGTCCTACCATCCTCAAGCTGTTTACCGGCAAATATCAGACGCTGCTGGTCAGGGGGA 39047
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||||||||| |||||||| || || || || | || || || ||| ||
Sbjct 39048 ATGCCTTCTTTGTCTTGAATCTTAGCCTTAACGTTATCAATCGTATCAGAGCTTTCTACT 39107
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||| ||| || || || | ||| || || || || |||||
Sbjct 39108 TCTAGGGTAACGGTCTTCCCAGTAAGAGTCTTGACAAAGATCTGCAT 39154
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || || | || | ||| || ||||| ||||| || || || ||||| ||
Sbjct 38700 CCTCCACGAAGACGAAGAACCAAGTGCAGGGTGGACTCCTTCTGGATATTATAGTCCGCA 38759
Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| ||| || | || |||||||| ||||| ||||| || | | ||| ||||| || ||
Sbjct 38760 AGGGTCCTGCCA-TCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGAGG 38818
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || ||||||||| ||| || || | || || || |||||
Sbjct 38819 AATTCCTTCCTTGTCCTGAATTTTTGCTTTCACATTATCAATAGTATCTGAGCTCTCCAC 38878
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| || || || || || | || || ||||||||||||||
Sbjct 38879 CTCCAAAGTGATTGTCTTCCCTGTAAGTGTCTTCACGAAAATTTGCAT 38926
>seq65811
Length=66007
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| || | ||| | ||| || ||||||||||||||||| ||||||||| |
Sbjct 55009 CCTCCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGGCC 55068
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| || || || || ||||| | ||||| || || ||
Sbjct 55069 AAGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGA 55128
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||||||||| || || ||| | |||||||| || ||
Sbjct 55129 ATGCCTTCCTTGTCTTGAATTTTAGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCAACT 55188
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| || || || || || ||||||||
Sbjct 55189 TCGAGCGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545
|| || | ||| || | ||| | ||| || ||||||||||| ||||||||||||| ||||
Sbjct 54781 CCACCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCC 54840
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| |||| | ||| || ||||| || || ||||| ||||| | |||||| || || ||
Sbjct 54841 AA-GGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGG 54899
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || |||||||| || ||| || ||| | |||||||| || ||
Sbjct 54900 AATACCCTCCTTGTCTTGAATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCAAC 54959
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || |||||||| ||||| | ||| || || || ||||||||
Sbjct 54960 CTCCAGGGTGATGGTTTTTCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| || | || | || | ||| || || || ||||||||||||||||| || ||
Sbjct 55237 CCTCCCCTCAAACGGAGGACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCCGCA 55296
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| ||| |||||||| || || ||||| |||| | ||||| || || ||
Sbjct 55297 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGAGGA 55356
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || ||| ||||| || | |||||||| || ||
Sbjct 55357 ATTCCCTCCTTATCCTGGATCTTTGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACT 55416
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| ||||| || ||||| | ||| |||||||| || |||||
Sbjct 55417 TCGAGAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 55463
>seq72241
Length=55963
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| || | ||| || || ||||| || || ||||| ||||| ||||| || ||
Sbjct 40176 CCCCCTCGAAGCCTCAAGACAAGATGTAGGGTTGACTCCTTCTGAATATTGTAATCCGCA 40235
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| || || || ||||| | ||||||||||| || ||
Sbjct 40236 AGGGTTCTACCGTCTTCCAGCTGCTTCCCGGCGAAAATTAGGCGCTGCTGATCAGGAGGA 40295
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| ||| || || ||| | || || || ||||||
Sbjct 40296 ATTCCTTCCTTATCTTGAATCTTTGCCTTAACGTTGTCAATAGTATCAGAACTTTCCACC 40355
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| |||||||| || |||| |||||| || |||||||||||
Sbjct 40356 TCAAGAGTGATGGTTTTGCCTGTTAGAGTTTTGACAAAAATTTGCAT 40402
Score = 114 bits (126), Expect = 1e-20
Identities = 167/235 (71%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||||| | || || || || || || ||||| || || || || ||| |
Sbjct 40632 CCACCGCGGAGTCTGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCG 40691
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| ||||| |||||||| || || || | |||||||||||||| ||
Sbjct 40692 AGGGTTCGGCCGTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAGGG 40751
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || |||||||| || ||||| ||| | ||| ||||| || ||
Sbjct 40752 ATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTATCGGAGCTCTCGACC 40811
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTTT 134720
|| || ||||| || |||||||||| ||||| ||||| || ||||| ||| |||
Sbjct 40812 TCAAGGGTAATTGTCTTACCGGTTAGGGTTTTCACGAAGATCTGCATCTTTCTTT 40866
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||||||| || || || ||||| |||||||||||||| || || |
Sbjct 39948 CCACCCCTCAGACGCAACACCAGATGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCT 40007
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || ||| || | ||| || || ||||| |||| | || ||||| || ||
Sbjct 40008 AGAGTACGACCGTCTTCCAACTGCTTCCCGGCAAAGATCAGTCTTTGTTGATCCGGAGGA 40067
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| |||||||| || ||||| ||| ||||| || | || || || ||| ||
Sbjct 40068 ATCCCTTCTTTATCCTGAATCTTTGCCTTGACATTATCGATGGTATCAGAACTTTCAACC 40127
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||||||| |||||||| || | || || || ||||| |||||
Sbjct 40128 TCAAGAGTAATAGTTTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 40174
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| | ||| ||||| || || || ||||||||||| || ||||| ||| |
Sbjct 40404 CCCCCACGGAGCCTCAAGACGAGATGAAGAGTAGATTCCTTTTGGATATTGTAATCGGCG 40463
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || | ||| || || || || || | | ||||||||| || ||
Sbjct 40464 AGAGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 40523
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || ||||| ||| | ||| ||||| || ||
Sbjct 40524 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCAACT 40583
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||||||| || || ||||| | ||||||||| || || |||||
Sbjct 40584 TCAAGAGTAATCGTCTTGCCGGTCAGAGTTTTAACAAATATCTGCAT 40630
>seq53817
Length=15024
Score = 122 bits (134), Expect = 9e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | || ||||| || ||||||||||| || ||||||||||| ||
Sbjct 3630 CCACCACGGAGGCGAAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCT 3689
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || ||| |||||||| || || || || || | ||||||||| || || ||
Sbjct 3690 AGAGTTCTG-CCGTCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 3748
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || || |||||||| ||||| ||| | || || || ||||| ||
Sbjct 3749 GATGCCCTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATGGTATCCGAGGATTCGAC 3808
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || ||||| || || || | ||||| ||||| || ||||||||
Sbjct 3809 CTCAAGGGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATTTT 3859
>seq42370
Length=41228
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| || |||| ||| || || || ||||| |||||||||||||| || || ||
Sbjct 10660 CCACCTCTCAGACGCAGCACCAGATGAAGGGTGGACTCCTTTTGAATGTTATAATCAGCT 10601
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || | || || | ||| || || ||||| ||||| | |||||| || || ||
Sbjct 10600 AGAGTTCTGCCA-TCTTCCAACTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGG 10542
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || ||||| ||| || || || | ||| || || ||| ||
Sbjct 10541 AATCCCTTCCTTATCCTGAATCTTTGCCTTAACATTATCAATTGTATCAGAACTTTCAAC 10482
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||||||||||||||| || | || ||||| ||||| |||||
Sbjct 10481 CTCAAGAGTAATGGTTTTACCAGTGAGGGTCTTAACAAAAATCTGCAT 10434
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560
||| ||||| || || || || || |||||||| ||||| ||| ||| || | ||
Sbjct 10190 CAAGACGAGATGAAGGGTCGACTCTTTTTGAATATTGTAATCGGCAAGAGTCCGGCCATC 10131
Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620
|| | || || || ||||| || | | ||||| || || || || ||||| || ||
Sbjct 10130 CTCCAATTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGAGGGATCCCTTCCTTATC 10071
Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680
|||||||| ||||| ||| | |||||||| || || ||||||||||| ||
Sbjct 10070 CTGAATTTTAGCCTTGACGTTGTCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATCGT 10011
Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||||| |||||||| || || |||||
Sbjct 10010 CTTTCCGGTTAGGGTTTTAACAAATATCTGCAT 9978
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559
||| ||||| ||||| || || ||||| || |||||||| || ||||| | | | | |
Sbjct 10418 CAAGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAAGGTTCTACCA-T 10360
Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619
| || | ||| || || ||||| |||| ||||||||||| || || || || || || |
Sbjct 10359 CCTCCAACTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGAATCCCCTCCTTAT 10300
Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679
||||||| || || || || | ||| || || || || || | ||||| |
Sbjct 10299 CTTGAATCTTCGCCTTAACGTTATCAATTGTATCAGAACTCTCGACCTCCAAGGTAATCG 10240
Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || | ||||||||| || ||||||||
Sbjct 10239 TCTTACCAGTCAGAGTTTTAACAAAGATTTGCAT 10206
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || || || || || |||||||| || ||||| || ||| |
Sbjct 9976 CCACCACGGAGACGAAGAACAAGATGAAGGGTTGATTCCTTCTGTATGTTATAATCGGCT 9917
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | |||||||| || || || | ||||||||||| || ||
Sbjct 9916 AGGGTTCGGCCGTCCTCCAATTGTTTGCCGGCGAAGATAAGGCGCTGCTGATCCGGAGGG 9857
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| || || ||||| || | || ||||| || ||
Sbjct 9856 ATACCCTCCTTATCTTGGATCTTAGCCTTGACATTATCAATAGTATCGGAACTCTCAACC 9797
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|||||||| ||||| || || |||| ||||| ||||| || ||||||
Sbjct 9796 TCGAGAGTTATGGTCTTGCCTGTTAGGGTTTTCACGAAGATCTGCATT 9749
>seq64144
Length=11632
Score = 105 bits (116), Expect = 7e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | || |||| || ||||||||||| || ||||||||||| ||
Sbjct 9094 CCACCACGGAGGCGAAGAACAAGGTAAAGGGTGGATTCCTTATGGATGTTGTAGTCAGCT 9153
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || ||| ||||| || || || || || | | ||||||||| || | ||
Sbjct 9154 AGTGTTCTG-CTGTCTTCGAGTTGCTTCCCGGCGAAGAGGAGACGCTGCTGGTCTAGTGG 9212
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || || |||||| ||||| ||| | || ||||| ||||| ||
Sbjct 9213 GATGCCGTCCTTGTCCGAAATTTTGGCCTTGACATTGTCAATGGTATCGGAGGATTCAAC 9272
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| ||||| ||||| || || || | ||||| ||||| || |||||||||
Sbjct 9273 CTCAAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATTTTG 9324
>seq67817
Length=4127
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563
|| ||||| | ||||||||||| || ||||||||||| || | | | || |||| ||
Sbjct 1405 ACAAGGTGAATGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCTG-TAGTCTTC 1463
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
||| || || || || || || | ||||||||| || || || ||||| || || ||
Sbjct 1464 GAGTTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCGA 1523
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|||||| ||||| ||| | || | ||| ||||| || || || || ||||| ||
Sbjct 1524 AATTTTGGCCTTGACATTGTCAATGGTATTGGAGGATTCGACCTCAAGGGTGATGGTCTT 1583
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || | ||||| ||||| || | |||||||
Sbjct 1584 CCCCGTGAGGGTTTTCACGAAGATCTACATTTTG 1617
>seq25273
Length=6599
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAG 134566
||||| || ||||||||||| || || |||||||| | | | | || ||| |||||
Sbjct 391 AGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCAGGTAGTGTTCTG-CTGTCTTCGAG 333
Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626
||| || || | || || | ||| ||||| || || || ||||| || || || |||||
Sbjct 332 CTGCTTCCCGGAGAAGATGAGACGTTGCTGGTCCGGTGGGATGCCCTCCTTCTCCTGAAT 273
Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686
||| ||||| ||| | || ||| | ||||| || || || || ||||| || ||
Sbjct 272 TTTGGCCTTGACATTGTCAATGGTATCGAAGGATTCGACCTCAAGGGTGATGGTCTTCCC 213
Query 134687 GGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | ||||| ||||| || |||||||||
Sbjct 212 CGTGAGGGTTTTCACGAAGATCTGCATTTTG 182
>seq55661
Length=20824
Score = 100 bits (110), Expect = 3e-16
Identities = 153/214 (71%), Gaps = 3/214 (1%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG-TCGCCAACGGTGTGAGAGTCGTC 134563
|| ||||| || ||||||||||| || ||||||||| | || | | | || | || ||
Sbjct 2587 ACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTTAGCTAGTGTTCTGTCA-TCTTC 2529
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||| || | || || || | ||||||||| || || || |||| || || || ||
Sbjct 2528 GAGCTGCTTCTCGGCGAAGATGAGACGCTGCTG-TCCGGTGGGATGCTCTCCTTGTCCTG 2470
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|||||| ||||| ||| | || ||||| ||||| || || | || ||||| ||
Sbjct 2469 AATTTTGGCCTTGACATTGTCAATGGTATCGGAGGATTCGACCTCAAAGGTGATGGTCTT 2410
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | | ||||| ||||| || |||||||||
Sbjct 2409 TCCCATGAGGGTTTTCACGAAGATCTGCATTTTG 2376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504897411201040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |