Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq73807 201 1e-46
seq65811 179 4e-40
seq72241 178 1e-39
seq42370 174 2e-38
seq53817 172 6e-38
seq64144 154 2e-32
seq67817 150 2e-31
seq25273 149 7e-31
seq55661 141 1e-28
seq73986 107 2e-18
>seq73807
Length=69832
Score = 201 bits (222), Expect = 1e-46
Identities = 183/229 (80%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || || ||||| ||||| ||||| ||||| || |
Sbjct 39382 ATGCAGATCTTTGTCAAGACTCTGACAGGAAAGACCATTACCCTTGAAGTTGAA--AGCT 39325
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | |||| || | || || |||||||||||||||||||||||||| |||||||
Sbjct 39324 CAGACACAATTGACAACGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCAGACC 39265
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| || | |||||||| || || ||||| ||||||| |||||||| |||||||| |
Sbjct 39264 AGCAACGCTTGATTTTTGCAGGGAAACAACTTGAGGATGGCCGTACCCTGGCAGACTACA 39205
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||||||||| ||||| ||||| || |||||| | || || |||||
Sbjct 39204 ATATCCAAAAGGAGTCCACACTTCACCTTGTCTTGAGACTCCGTGGTGG 39156
Score = 183 bits (202), Expect = 3e-41
Identities = 179/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| ||||| || || || ||||| || || ||||| ||||| || |
Sbjct 39838 ATGCAAATCTTTGTTAAGACCCTGACAGGAAAGACCATCACCCTTGAAGTTGAA--AGCT 39781
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | |||| ||| | || || ||||| |||||||||||||||||||| |||||||
Sbjct 39780 CAGACACAATTGACAATGTCAAAGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACC 39721
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| | | ||||| || || || ||||| ||||||| |||||||| |||||||| |
Sbjct 39720 AGCAAAGATTGATTTTCGCAGGGAAACAACTGGAGGATGGCCGTACCCTTGCAGACTACA 39661
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | |||||||| ||||| || ||||| |||||| | ||||| |||||
Sbjct 39660 ACATACAAAAGGAGTCCACCCTCCATCTTGTCTTGAGACTTCGTGGTGG 39612
Score = 179 bits (198), Expect = 4e-40
Identities = 180/232 (78%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| ||||| || ||||| || ||| | ||||| ||| || |
Sbjct 38926 ATGCAAATTTTCGTGAAGACACTTACAGGGAAGACAATCACTTTGGAGGTGGAG--AGCT 38869
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| |||| ||| |||| || ||||||||||||||||| |||||||||||||| |
Sbjct 38868 CAGATACTATTGATAATGTGAAAGCAAAAATTCAGGACAAGGAAGGAATTCCTCCAGATC 38809
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
| ||| | || || |||||||| ||||| |||||||||| | ||||| || |||||||
Sbjct 38808 AACAGAGGCTTATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCGGACTATA 38749
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|| |||| ||||| ||||| || || | || | |||||||| || || ||
Sbjct 38748 ATATCCAGAAGGAGTCCACCCTGCACTTGGTTCTTCGTCTTCGTGGAGGCCA 38697
Score = 178 bits (196), Expect = 1e-39
Identities = 178/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || || || ||||| || || || || || || || |
Sbjct 39610 ATGCAAATCTTCGTTAAGACCCTGACAGGAAAGACCATCACCCTGGAAGTCGAA--AGCT 39553
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | |||| ||| | || || |||||||||||||||||||||||||| || || |
Sbjct 39552 CAGACACAATTGACAATGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGATC 39493
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| ||| | ||||||||||| || || || ||||||| |||||||| |||||||| |
Sbjct 39492 AGCAACGTTTGATTTTTGCTGGGAAACAGCTTGAGGATGGCCGTACCCTTGCAGACTACA 39433
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| ||||| ||||| || || ||||| || || |||||
Sbjct 39432 ATATTCAAAAGGAGTCCACCCTTCACCTTGTTTTGCGACTCCGTGGTGG 39384
Score = 159 bits (176), Expect = 4e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| ||||| || ||||| |||| || || || || |
Sbjct 39154 ATGCAGATCTTTGTCAAGACTCTTACTGGGAAGACCGTTACCCTAGAAGTAGAAAGCTCT 39095
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | |||||||| ||||| ||||| || || ||||| || ||||||
Sbjct 39094 GATACGATTGATAACGTTAAGGCTAAGATTCAAGACAAAGAAGGCATTCCCCCTGACCAG 39035
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || ||||| ||||| || || ||||||| | | || || || || |||||
Sbjct 39034 CAGCGTCTGATATTTGCCGGTAAACAGCTTGAGGATGGTAGGACACTTGCTGATTATAAC 38975
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
|||||||||| || ||||| ||| | || ||||||
Sbjct 38974 ATCCAAAAGGAGTCAACTCTGCATTTGGTGTTGCGT 38939
>seq65811
Length=66007
Score = 179 bits (198), Expect = 4e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||| ||||| | ||||| |||||||| || || ||||| |||
Sbjct 54581 AATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACTATCACCCTGGAGGTGGAGAGCTC 54522
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| ||||||| ||||| || ||||||||||||||||| ||||||||
Sbjct 54521 TGACACCATTGACAATGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCA 54462
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | || |||||||||||||| || || |||| | || | || ||||| ||
Sbjct 54461 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGAAGGACTTTGGCTGACTACAA 54402
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| |||| ||||| || || || ||||| ||| | ||||| || ||||||
Sbjct 54401 TATCCAGAAGGAGTCAACACTCCATCTTGTCCTCCGTCTCCGTGGTGGA 54353
Score = 159 bits (176), Expect = 4e-34
Identities = 174/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| | ||||| ||||| || || || || |||||| || |
Sbjct 55235 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACGCTCGAAGTTGAG--AGCT 55178
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | || | |||||||||||||| |||||||| || ||||| |||||||
Sbjct 55177 CCGACACCATCGACAACGTAAAGGCTAAAATTCAAGACAAGGAAGGCATTCCACCAGACC 55118
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| | | || || || |||||||| |||||||| | || ||| | || ||||| |
Sbjct 55117 AGCAAAGATTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACA 55058
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||||||||| ||||| | || | ||||| || || ||
Sbjct 55057 ATATTCAAAAGGAATCCACCCTTCACTTGGTGCTTCGTCTCCGTGGAGG 55009
Score = 156 bits (172), Expect = 5e-33
Identities = 173/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| || ||||| || || || || || ||||||||| || |
Sbjct 55007 ATGCAAATCTTTGTCAAGACTCTCACCGGAAAAACCATCACCCTGGAGGTTGAG--AGCT 54950
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||||| || |||| || || ||||| ||||||||||| ||||| |||||||
Sbjct 54949 CCGACACCATTGACAACGTGAAAGCCAAGATTCAAGACAAGGAGGGTATTCCACCAGACC 54890
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | | || ||||| || ||||| || || || | || ||| | || ||||| |
Sbjct 54889 AGCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGCACCTTGGCGGACTACA 54830
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | || ||||||||||| ||||| | || | ||||| || |||||
Sbjct 54829 ACATTCAGAAGGAATCCACCCTTCACTTGGTGCTTCGTCTCCGTGGTGG 54781
Score = 136 bits (150), Expect = 5e-27
Identities = 162/218 (74%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| |||||||| ||||| || ||||| || || ||| || |
Sbjct 55463 ATGCAGATCTTCGTTAAGACTCTTACCGGAAAGACCATCACTCTCGAAGTCGAG--AGCT 55406
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | || | ||||| || || ||||| ||||||||||||||||||||||
Sbjct 55405 CCGACACCATCGATAACGTCAAGGCAAAGATCCAGGATAAGGAGGGAATTCCTCCAGACC 55346
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| | || || ||||| || ||||| |||||||| | | ||||| || || || |
Sbjct 55345 AGCAAAGGCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCGGATTACA 55286
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
| | |||||||| || || || || | ||| | |||
Sbjct 55285 ACATTCAAAAGGAGTCTACCCTCCACTTGGTCCTCCGT 55248
Score = 86.0 bits (94), Expect = 7e-12
Identities = 82/103 (80%), Gaps = 4/103 (4%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || |||||||| ||||| ||||||||| || |
Sbjct 54779 ATGCAGATCTTCGTGAAGACCCTCACTGGGAAGACTATCACTCTCGAGGTTGAG--AGCT 54722
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGA 27506
|| | ||||| || ||||||||||||| |||||||||||
Sbjct 54721 CCGACACCATTGACAACGTGAAGGCTAAAATCCAGGACAAGGA 54679
>seq72241
Length=55963
Score = 178 bits (196), Expect = 1e-39
Identities = 178/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || || ||||| ||||| ||||| |||||||| ||| || |
Sbjct 40858 ATGCAGATCTTCGTGAAAACCCTAACCGGTAAGACAATTACCCTTGAGGTCGAG--AGCT 40801
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| || | ||| | |||||||| ||||| |||||||||||||| ||||| || |
Sbjct 40800 CCGATACAATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGAATCCCTCCCGATC 40741
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||||| ||||| || || || || ||||||||||| | || ||||| || || ||||
Sbjct 40740 AGCAGCGCCTAATCTTCGCCGGCAAACAACTCGAGGACGGCCGAACCCTCGCCGATTATA 40681
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| || ||||| ||||| ||| | | || ||||||||
Sbjct 40680 ATATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCAGACTCCGCGGTGG 40632
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||||||||| ||||| || || |||||||||||||||||||| |
Sbjct 40174 ATGCAGATTTTTGTCAAGACCCTTACTGGTAAAACTATTACTCTTGAGGTTGAAAGTTCT 40115
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | ||||| || |||||||| || || || |||||||| || ||
Sbjct 40114 GATACCATCGATAATGTCAAGGCAAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCAA 40055
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| || ||||| | || || | |||||| ||||| || |||||
Sbjct 40054 CAAAGACTGATCTTTGCCGGGAAGCAGTTGGAAGACGGTCGTACTCTAGCTGATTATAAC 39995
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||||||||| || |||||||| | |||||
Sbjct 39994 ATTCAAAAGGAGTCCACTCTTCATCTGGTGTTGCGTCTGAGGGGTGG 39948
Score = 168 bits (186), Expect = 8e-37
Identities = 176/229 (77%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || ||||||||||| ||||||||||| |||||| || |
Sbjct 40630 ATGCAGATATTTGTTAAAACTCTGACCGGCAAGACGATTACTCTTGAAGTTGAG--AGTT 40573
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| |||| || | ||||| || |||||||| ||||||||||||||||| || |
Sbjct 40572 CCGATACAATTGACAACGTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCTCCGGATC 40513
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | || || || || || ||||| | ||||| | | || || || || || |
Sbjct 40512 AGCAGAGGCTTATCTTCGCCGGGAAGCAGTTGGAGGACGGCAGGACTCTCGCCGATTACA 40453
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||||||||||| ||||||||||| |||||| | || || || ||
Sbjct 40452 ATATCCAAAAGGAATCTACTCTTCATCTCGTCTTGAGGCTCCGTGGGGG 40404
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| |||||||| || || || ||||| || || ||||||||||| || |
Sbjct 40402 ATGCAAATTTTTGTCAAAACTCTAACAGGCAAAACCATCACTCTTGAGGTGGAAAGTTCT 40343
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||||| || ||||| || ||||| ||||||||||| || |||
Sbjct 40342 GATACTATTGACAACGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAG 40283
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| |||||||| || || ||||| || || || | | | ||||| || || || |||
Sbjct 40282 CAGCGCCTAATTTTCGCCGGGAAGCAGCTGGAAGACGGTAGAACCCTTGCGGATTACAAT 40223
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || || ||||| |||||| | ||||| || ||
Sbjct 40222 ATTCAGAAGGAGTCAACCCTACATCTTGTCTTGAGGCTTCGAGGGGG 40176
Score = 147 bits (162), Expect = 2e-30
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| | || || ||||| ||||| | ||||||||| || |
Sbjct 39946 ATGCAGATATTTGTGAAGACATTGACTGGGAAGACGATTACGTTAGAGGTTGAG--AGTT 39889
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||| | ||| ||||| | || ||||||||||| ||||||||||| || || |
Sbjct 39888 CAGATACCATAGATAATGTGAAGACCAAGATTCAGGACAAAGAGGGAATTCCCCCGGATC 39829
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | || || || ||||| ||||| || || |||| ||||| || || || || |
Sbjct 39828 AGCAGAGGCTTATATTCGCTGGAAAGCAGCTTGAAGATGGGCGTACTCTGGCTGATTACA 39769
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| ||||| || || || ||| | || || || || ||
Sbjct 39768 ATATCCAGAAGGAGTCCACCCTGCACCTTGTCCTCCGCCTCCGAGGCGG 39720
>seq42370
Length=41228
Score = 174 bits (192), Expect = 2e-38
Identities = 177/229 (77%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || ||||| ||||| |||||||| ||||||||| || |
Sbjct 9978 ATGCAGATATTTGTTAAAACCCTAACCGGAAAGACGATTACTCTCGAGGTTGAG--AGTT 10035
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | |||| || | ||||||||||||||||| ||||| || || ||||| ||||
Sbjct 10036 CCGACACTATTGACAACGTCAAGGCTAAAATTCAGGATAAGGAAGGGATCCCTCCGGACC 10095
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| | || || |||||||| |||||| | ||||||| || || || || || || |
Sbjct 10096 AGCAAAGGCTCATCTTTGCTGGGAAGCAATTGGAGGATGGCCGGACTCTTGCCGATTACA 10155
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | ||||| || || || |||||||| |||||| | |||||||||||
Sbjct 10156 ATATTCAAAAAGAGTCGACCCTTCATCTCGTCTTGAGGCTTCGCGGTGG 10204
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || || || || ||||| ||||| | ||||| ||| |
Sbjct 10206 ATGCAAATCTTTGTTAAAACTCTGACTGGTAAGACGATTACCTTGGAGGTCGAGAGTTCT 10265
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||||| || ||||| || |||||||| |||||||| || |||
Sbjct 10266 GATACAATTGATAACGTTAAGGCGAAGATTCAAGATAAGGAGGGGATTCCTCCGGATCAG 10325
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| | ||||||| | | ||| | || || || ||
Sbjct 10326 CAGCGCCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTAGAACCTTGGCTGATTACAAC 10385
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||||| |||||| | |||||||||||
Sbjct 10386 ATCCAGAAGGAGTCGACTCTACATCTCGTCTTGAGGCTTCGCGGTGG 10432
Score = 161 bits (178), Expect = 1e-34
Identities = 169/220 (77%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||||||||| | || || || ||||||||||| ||||||||| || |
Sbjct 10662 ATGCAGATATTTGTCAAGACATTGACAGGGAAAACTATTACTCTGGAGGTTGAG--AGCT 10719
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||| | ||| ||||||| || || ||||| |||||||| ||||| || || |
Sbjct 10720 CAGATACCATAGATAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATTCCCCCGGATC 10779
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | || || || ||||| ||||| |||||||||| ||||| | || || || |
Sbjct 10780 AGCAGAGGCTCATCTTCGCTGGGAAGCAGCTCGAGGATGGACGTACTTTGGCTGATTACA 10839
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|| | || ||||||||||| || || || ||| | |||||
Sbjct 10840 ATATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGTCT 10879
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || || || ||||||||||||||||| |
Sbjct 10434 ATGCAGATTTTTGTTAAGACCCTCACTGGTAAAACCATTACTCTTGAGGTTGAAAGTTCT 10493
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | ||||| || |||||||| ||||| || |||||||| ||||||
Sbjct 10494 GATACAATTGATAATGTTAAGGCAAAGATTCAGGATAAGGAAGGGATTCCTCCGGACCAG 10553
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| || ||||| | || |||| | || ||||| || |||||
Sbjct 10554 CAGAGATTGATCTTTGCCGGGAAGCAGTTGGAAGATGGCAGAACTCTAGCTGATTATAAC 10613
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||| |||||||| || ||||||| | |||||
Sbjct 10614 ATTCAAAAGGAGTCCACCCTTCATCTGGTGCTGCGTCTGAGAGGTGG 10660
>seq53817
Length=15024
Score = 172 bits (190), Expect = 6e-38
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || || || || || || ||||| || || |||||||| || ||
Sbjct 3857 AATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAATCCTC 3798
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||||| ||| | ||||| |||||||||||||||||||| || || || |||||
Sbjct 3797 GGATACCATTGACAATGTCAAGGCCAAAATTCAGGACAAGGAGGGCATCCCACCGGACCA 3738
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || || |||||||| ||||| || | | || ||||| ||||| ||
Sbjct 3737 GCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGACGGCAGAACTCTAGCTGACTACAA 3678
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| ||||| || || | || || || |||||
Sbjct 3677 CATCCAGAAGGAATCCACCCTTCACCTTGTTCTTCGCCTCCGTGGTGG 3630
>seq64144
Length=11632
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || || || || || || ||||| || |||||||||||||| ||
Sbjct 9321 AATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACTCTTGAGGTTGAATCCTC 9262
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||||| ||| | ||||| |||||| ||||||||| || || || | ||||||
Sbjct 9261 CGATACCATTGACAATGTCAAGGCCAAAATTTCGGACAAGGACGGCATCCCACTAGACCA 9202
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| | || || || ||||||||||| || | || ||||| ||||| ||
Sbjct 9201 GCAGCGTCTCCTCTTCGCCGGGAAGCAACTCGAAGACAGCAGAACACTAGCTGACTACAA 9142
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| ||| | || || | || || || |||||
Sbjct 9141 CATCCATAAGGAATCCACCCTTTACCTTGTTCTTCGCCTCCGTGGTGG 9094
>seq67817
Length=4127
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||| | ||||| || || || || || || ||||| || || |||||||| || ||
Sbjct 1614 AATGTAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAATCCTC 1555
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| ||||| ||| | ||||| |||||| |||||||||||| || || ||||||||
Sbjct 1554 CAATACCATTGACAATGTCAAGGCCAAAATTTCGGACAAGGAGGGCATCCCACCAGACCA 1495
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || || || ||||||||||| || | | || ||||| ||||| ||
Sbjct 1494 GCAGCGTCTCATCTTCGCCGGGAAGCAACTCGAAGACTACAGAACACTAGCTGACTACAA 1435
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| |||| || || | || || || | |||
Sbjct 1434 CATCCAGAAGGAATCCACCATTCACCTTGTTCTTCGCCTCCGTGTTGG 1387
>seq25273
Length=6599
Score = 149 bits (164), Expect = 7e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || || || || || || ||||| || || |||||||| || ||
Sbjct 185 AATGCAGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAATCCTT 244
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||||| ||| | ||||| ||||||||||| |||||||| || || || |||||
Sbjct 245 CGATACCATTGACAATGTCAAGGCCAAAATTCAGGAGAAGGAGGGCATCCCACCGGACCA 304
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| ||||| || || | || ||||| ||||| || | || ||| | ||||| ||
Sbjct 305 GCAACGTCTCATCTTCTCCGGGAAGCAGCTCGAAGACAGCAGAACACTACCTGACTACAA 364
Query 27585 TGTCCAAAAGGAATCCACTCTTCATC-TAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||||||||||||||| | || |||| || || | |||||
Sbjct 365 TATCCAGAAGGAATCCACTCTTCACCTTATTCTT-CGCCTCCATGGTGG 412
>seq55661
Length=20824
Score = 141 bits (156), Expect = 1e-28
Identities = 169/228 (74%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || || || || | || ||||| || || ||||||| || ||
Sbjct 2379 AATGCAGATCTTCGTGAAAACCCTCATGGGAAAGACCATCACCTTTGAGGTCGAATCCTC 2438
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| ||||| ||| | ||||| |||||||||||||||||| | || || || || ||
Sbjct 2439 CGATACCATTGACAATGTCAAGGCCAAAATTCAGGACAAGGAGAGCATCCCACCGGA-CA 2497
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || || | ||||| ||||| ||||| | || ||||| |||| ||
Sbjct 2498 GCAGCGTCTCATCTTCGCCGAGAAGCAGCTCGAAGATGACAGAACACTAGCTAACTACAA 2557
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| ||||| || || | | || || |||||
Sbjct 2558 CATCCAGAAGGAATCCACCCTTCACCTTGTTCTTCACCTCCGTGGTGG 2605
>seq73986
Length=64159
Score = 107 bits (118), Expect = 2e-18
Identities = 107/139 (77%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 27495 TCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACT 27554
|||||| || || || |||||||| || |||||| | || |||||||||||||||||| |
Sbjct 17175 TCAGGATAAAGAAGGTATTCCTCCCGATCAGCAGAGACTGATTTTTGCTGGTAAGCAATT 17116
Query 27555 CGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|| |||| ||||| | || ||||||||| |||| || ||||| || ||||| | ||
Sbjct 17115 GGAAGATGGCCGTACTTTGGCTGACTATAATATCCAGAAAGAATCAACACTTCACTTGGT 17056
Query 27615 CTTGCGTCTTCGCGGTGGA 27633
||| | ||| | || |||
Sbjct 17055 TTTGAGGCTTAGAGGAGGA 17037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569745065558240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |