Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq65811 203 8e-47
seq73807 190 5e-43
seq72241 187 6e-42
seq42370 176 1e-38
seq71687 158 3e-33
seq53817 158 3e-33
seq25273 136 9e-27
seq55661 132 1e-25
>seq65811
Length=66007
Score = 203 bits (224), Expect = 8e-47
Identities = 172/212 (81%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || ||||| ||||| ||||| |||||||||||||| || || ||
Sbjct 55252 AGGACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCCGCAAGGGTTCTGCCGTCC 55311
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| || | ||| ||||| ||||||| ||| ||||| |||
Sbjct 55312 TCGAGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGAGGAATTCCCTCCTTATCC 55371
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || ||||| ||||||||||| ||||| || || ||||||||||| |||
Sbjct 55372 TGGATCTTTGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTC 55431
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || |||||||| || || | ||||||
Sbjct 55432 TTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 55463
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || || ||||| || ||||| || || || || | ||||||||||||
Sbjct 54369 AGGACAAGATGGAGTGTTGACTCCTTCTGGATATTGTAGTCAGCCAAAGTCCTTCCATCT 54428
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| | | || ||||| || |||| ||| ||||||||
Sbjct 54429 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 54488
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| ||| ||||| || || |||||||||||||| || ||||| || ||||| |||
Sbjct 54489 TGGATTTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAGGGTGATAGTC 54548
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || | ||||| ||||| | |||||||
Sbjct 54549 TTACCGGTCAAGGTCTTCACAAAGATCTGCATT 54581
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| ||||| || || || ||||| || ||||| | ||| | || |||
Sbjct 54796 AGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCCAAGGTGCGGCCGTCT 54855
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| | | || ||||| || |||| || ||||||||
Sbjct 54856 TCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCT 54915
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||||||| || |||||||| ||||| |||||||| || ||||| ||
Sbjct 54916 TGAATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTT 54975
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| ||||| | |||||
Sbjct 54976 TTTCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007
Score = 149 bits (164), Expect = 1e-30
Identities = 168/225 (75%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | || || | |||||| ||||| || ||||| || || || || || |
Sbjct 55011 TCCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGGCCAA 55070
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | || || || |||||||| || |||||||| | | ||| ||||| || ||||
Sbjct 55071 GGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAAT 55130
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||||||||||| || || || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 55131 GCCTTCCTTGTCTTGAATTTTAGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCAACTTC 55190
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| |||||||| || | ||||| ||||| | |||||
Sbjct 55191 GAGCGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235
Score = 107 bits (118), Expect = 4e-18
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||| || |||||||| || |||||||| ||||| |||||||||||
Sbjct 54678 TTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCGAG 54737
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 54738 AGTGATAGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCAT 54779
>seq73807
Length=69832
Score = 190 bits (210), Expect = 5e-43
Identities = 177/225 (79%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| |||||| | || || | ||| || |||||||| || ||||| ||||| ||||||||
Sbjct 38702 TCCACGAAGACGAAGAACCAAGTGCAGGGTGGACTCCTTCTGGATATTATAGTCCGCAAG 38761
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|||||| ||||| || ||||||||||| || |||||||| | ||||| || |||||||
Sbjct 38762 GGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGAGGAAT 38821
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||||||||||||||| || ||| |||||| || || || || || ||||| || |||||
Sbjct 38822 TCCTTCCTTGTCCTGAATTTTTGCTTTCACATTATCAATAGTATCTGAGCTCTCCACCTC 38881
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| |||||| ||||| || || || ||||| || || | |||||
Sbjct 38882 CAAAGTGATTGTCTTCCCTGTAAGTGTCTTCACGAAAATTTGCAT 38926
Score = 188 bits (208), Expect = 2e-42
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| | |||||||||||| |||||||| |||||||| || || || || |||||
Sbjct 39161 ACGGAGTCTCAAGACAAGGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCTGCCAGGGT 39220
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || || || || ||||| || || | |||||| ||||| || |||| |||
Sbjct 39221 ACGGCCATCCTCAAGTTGTTTCCCTGCAAAAATCAAGCGTTGCTGGTCTGGGGGAATTCC 39280
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| || || ||| ||||| || || ||||| ||||||||||| || ||
Sbjct 39281 CTCCTTGTCCTGAATTTTGGCTTTAACGTTGTCAATTGTGTCTGAGCTTTCAACTTCAAG 39340
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| || |||||||| ||||| | ||||||
Sbjct 39341 GGTAATGGTCTTTCCTGTCAGAGTCTTGACAAAGATCTGCAT 39382
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||||||||| | |||||| || || |||||||| ||||| ||||| || || ||||||||
Sbjct 39617 ACGAAGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCAAGGGT 39676
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| ||||| || || |||||||| || | | ||| ||||| || |||| |||
Sbjct 39677 ACGGCCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGAATTCC 39736
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||| || ||| || || || || ||||| ||||||||||| || ||
Sbjct 39737 CTCCTTGTCCTGGATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACTTCAAG 39796
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| || || ||||| ||||| | |||||
Sbjct 39797 GGTGATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCAT 39838
Score = 183 bits (202), Expect = 7e-41
Identities = 173/221 (78%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| || | |||||| || || |||||||| ||||| ||||||||||| ||||||||
Sbjct 39846 CGAAGCCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTATAATCTGCAAGGGTA 39905
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| ||||| || ||||| || ||||| | | || || ||||| |||| ||||
Sbjct 39906 CGACCATCCTCCAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGGGGAATTCCT 39965
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| || || ||| ||| || || || || |||||||| || || || ||||||
Sbjct 39966 TCCTTGTCTTGAATTTTTGCTTTGACATTATCAATAGTGTCAGAACTCTCTACTTCGAGA 40025
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || ||||| ||||| ||||| | ||||||
Sbjct 40026 GTTATTGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 40066
Score = 163 bits (180), Expect = 7e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| ||||| ||||| ||||||||||||||||| ||||| ||||| ||||| || |||||
Sbjct 38952 TGCAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGTGTCCTACCATCCTCAAGCTGT 39011
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || || || || || || |||||||| |||| ||||| ||||| || |||||
Sbjct 39012 TTACCGGCAAATATCAGACGCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGAATCTTA 39071
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| || || || ||||||||||| || || || || | ||||| || ||
Sbjct 39072 GCCTTAACGTTATCAATCGTATCAGAGCTTTCTACTTCTAGGGTAACGGTCTTCCCAGTA 39131
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| | ||||||
Sbjct 39132 AGAGTCTTGACAAAGATCTGCAT 39154
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| | ||||||||||| |||||||| ||||| || || || || ||||||||
Sbjct 39389 ACGGAGTCGCAAAACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCTGCAAGGGT 39448
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||| || || || || || | ||||| || ||||| |||| |||
Sbjct 39449 ACGGCCATCCTCAAGCTGTTTCCCAGCAAAAATCAAACGTTGCTGATCAGGGGGAATTCC 39508
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| || || ||| || || || || ||||| |||||||| || || ||
Sbjct 39509 CTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCGACTTCCAG 39568
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| || || ||||| || || | |||||
Sbjct 39569 GGTGATGGTCTTTCCTGTCAGGGTCTTAACGAAGATTTGCAT 39610
>seq72241
Length=55963
Score = 187 bits (206), Expect = 6e-42
Identities = 174/221 (79%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| || | |||||| || || || ||||| || || || || ||||||||||||||
Sbjct 40182 CGAAGCCTCAAGACAAGATGTAGGGTTGACTCCTTCTGAATATTGTAATCCGCAAGGGTT 40241
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
|| || |||||||||||||| || ||||| || ||||| || || |||||||||| ||||
Sbjct 40242 CTACCGTCTTCCAGCTGCTTCCCGGCGAAAATTAGGCGCTGCTGATCAGGAGGAATTCCT 40301
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| || || |||||| || ||||| || || || ||||| ||||| ||||| |||
Sbjct 40302 TCCTTATCTTGAATCTTTGCCTTAACGTTGTCAATAGTATCAGAACTTTCCACCTCAAGA 40361
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || || ||||| || ||||| | |||||
Sbjct 40362 GTGATGGTTTTGCCTGTTAGAGTTTTGACAAAAATTTGCAT 40402
Score = 179 bits (198), Expect = 9e-40
Identities = 165/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| || |||||||||||||| ||||| ||||||||||| || || || | || ||||||
Sbjct 39966 ACCAGATGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCTAGAGTACGACCGTCTTCC 40025
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
| |||||| || || ||||| || | |||||| || ||||||| ||||| || |||||
Sbjct 40026 AACTGCTTCCCGGCAAAGATCAGTCTTTGTTGATCCGGAGGAATCCCTTCTTTATCCTGA 40085
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
|||||| || || || |||||||| ||||| ||||||||||| ||||| || || ||
Sbjct 40086 ATCTTTGCCTTGACATTATCGATGGTATCAGAACTTTCAACCTCAAGAGTAATAGTTTTA 40145
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| ||||| | ||||||
Sbjct 40146 CCAGTAAGGGTCTTGACAAAAATCTGCAT 40174
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || | ||| || |||||||| || || |||||||| || ||||| || || ||
Sbjct 40409 ACGGAGCCTCAAGACGAGATGAAGAGTAGATTCCTTTTGGATATTGTAATCGGCGAGAGT 40468
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| || || |||| |||||| || ||||||||||| | || || || ||||||| |||
Sbjct 40469 CCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCC 40528
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| ||||| || ||||| || || || || || || ||||| || ||
Sbjct 40529 CTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCAACTTCAAG 40588
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| |||||||| || || ||||| || ||||| | ||||||
Sbjct 40589 AGTAATCGTCTTGCCGGTCAGAGTTTTAACAAATATCTGCAT 40630
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || ||||| || ||||| || || || | ||||||
Sbjct 39735 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGAGTACGCCCATCT 39794
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || ||||| ||||| | || || || || |||| ||| || ||||||
Sbjct 39795 TCAAGCTGCTTTCCAGCGAATATAAGCCTCTGCTGATCCGGGGGAATTCCCTCTTTGTCC 39854
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||| || || ||||| || || || |||||||| | || ||||||
Sbjct 39855 TGAATCTTGGTCTTCACATTATCTATGGTATCTGAACTCTCAACCTCTAACGTAATCGTC 39914
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 39915 TTCCCAGTCAATGTCTTCACAAATATCTGCAT 39946
>seq42370
Length=41228
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || ||||| |||||||| ||||| ||||||||||| || || || || ||||||
Sbjct 10645 AGCACCAGATGAAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAGAGTTCTGCCATCT 10586
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || || ||||| | | || ||||| ||||||| |||||||| |||
Sbjct 10585 TCCAACTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGAATCCCTTCCTTATCC 10526
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| || || || || || || ||||| ||||||||||| ||||| || ||
Sbjct 10525 TGAATCTTTGCCTTAACATTATCAATTGTATCAGAACTTTCAACCTCAAGAGTAATGGTT 10466
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| ||||| | ||||||
Sbjct 10465 TTACCAGTGAGGGTCTTAACAAAAATCTGCAT 10434
Score = 174 bits (192), Expect = 4e-38
Identities = 171/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| || | ||| || ||||| || ||||||||||| || || ||||| ||||| |||
Sbjct 10198 CGAAGCCTCAAGACGAGATGAAGGGTCGACTCTTTTTGAATATTGTAATCGGCAAGAGTC 10139
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| |||| ||||| || || ||||| || | ||| ||||| ||||| | |||
Sbjct 10138 CGGCCATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGAGGGATCCCT 10079
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||| || || || ||||| || || ||||| || || ||||||||||||
Sbjct 10078 TCCTTATCCTGAATTTTAGCCTTGACGTTGTCAATAGTGTCGGAACTCTCAACCTCGAGA 10019
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||||||||| || || || || ||||| | ||||||
Sbjct 10018 GTAATCGTCTTTCCGGTTAGGGTTTTAACAAATATCTGCAT 9978
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||| || || || || || ||||| || | || | ||||||
Sbjct 10873 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTACGTCCATCC 10814
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || | || || || || |||| || ||||| |||
Sbjct 10813 TCGAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTATCC 10754
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || ||||| || ||||| |||||||| ||||| || ||
Sbjct 10753 TGGATCTTGGCCTTCACATTATCTATGGTATCTGAGCTCTCAACCTCCAGAGTAATAGTT 10694
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 10693 TTCCCTGTCAATGTCTTGACAAATATCTGCAT 10662
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| ||||| || || || || || ||||||||||| || ||||| | || ||
Sbjct 9961 AGAACAAGATGAAGGGTTGATTCCTTCTGTATGTTATAATCGGCTAGGGTTCGGCCGTCC 9902
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| || ||||| |||||||||||||| || || || ||||| | || ||||| ||
Sbjct 9901 TCCAATTGTTTGCCGGCGAAGATAAGGCGCTGCTGATCCGGAGGGATACCCTCCTTATCT 9842
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || || || || || || |||||||||||||| || |||
Sbjct 9841 TGGATCTTAGCCTTGACATTATCAATAGTATCGGAACTCTCAACCTCGAGAGTTATGGTC 9782
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || || || || || | |||||||
Sbjct 9781 TTGCCTGTTAGGGTTTTCACGAAGATCTGCATT 9749
>seq71687
Length=64904
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| |||||||| | |||||| || ||
Sbjct 44701 AGGACCAGGTGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGCTAAGGTCCTGCCTTCC 44760
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || | || || || || || | |||||||| ||
Sbjct 44761 TCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGTGGGATGCCTTCCTTATCT 44820
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || ||||| || ||| |||||||||||| || || |||
Sbjct 44821 TGGATCTTCGCCTTCACATTGTCAATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTC 44880
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || || || || || | |||||| ||
Sbjct 44881 TTACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 44915
>seq53817
Length=15024
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||| ||||| || || |||||||| || || || || || || || |||
Sbjct 3645 AGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGAGTTCTGCCGTCT 3704
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || || | || |||||||||
Sbjct 3705 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 3764
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || || || || || ||||| || ||| ||| ||||| || ||||| |||
Sbjct 3765 TGAATTTTGGCCTTGACATTGTCAATGGTATCCGAGGATTCGACCTCAAGGGTGATGGTC 3824
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| || || || || | |||||||||
Sbjct 3825 TTCCCCGTGAGGGTTTTCACGAAGATCTGCATTTT 3859
>seq25273
Length=6599
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210908 AAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAG 210967
||||||||||||||| || || ||||| || || || | || || || | ||||| ||
Sbjct 392 AAGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCAGGTAGTGTTCTGCTGTCTTCGAG 333
Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027
|||||| || | |||||| || ||||| ||||| || || | || ||||| ||||| ||
Sbjct 332 CTGCTTCCCGGAGAAGATGAGACGTTGCTGGTCCGGTGGGATGCCCTCCTTCTCCTGAAT 273
Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087
|| || || || || ||||| || || ||| ||||| || ||||| ||||| ||
Sbjct 272 TTTGGCCTTGACATTGTCAATGGTATCGAAGGATTCGACCTCAAGGGTGATGGTCTTCCC 213
Query 211088 CGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||| || || || || | |||||||||
Sbjct 212 CGTGAGGGTTTTCACGAAGATCTGCATTTT 183
>seq55661
Length=20824
Score = 132 bits (146), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||| ||||| || || |||||||| || | || || || || |||||
Sbjct 2590 AGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTTAGCTAGTGTTCTGTCATCT 2531
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| | |||||||| || || || | ||| || || | | |||||||||
Sbjct 2530 TCGAGCTGCTTCTCGGCGAAGATGAGACGCTGCT-GTCCGGTGGGATGCTCTCCTTGTCC 2472
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || || || || || ||||| || ||| ||| ||||| | ||||| |||
Sbjct 2471 TGAATTTTGGCCTTGACATTGTCAATGGTATCGGAGGATTCGACCTCAAAGGTGATGGTC 2412
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||| |||| || || || || | |||||||||
Sbjct 2411 TTTCCCATGAGGGTTTTCACGAAGATCTGCATTTT 2377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1157974235641230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |