Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq65811 163 7e-35
seq72241 161 2e-34
seq42370 152 1e-31
seq73807 138 3e-27
seq71687 131 4e-25
seq25273 131 4e-25
seq75777 104 6e-17
seq61105 102 2e-16
seq65714 100 7e-16
seq29328 98.7 2e-15
seq73880 96.9 8e-15
seq29494 96.9 8e-15
seq70788 95.1 3e-14
seq67014 95.1 3e-14
seq73986 93.3 1e-13
seq65514 93.3 1e-13
seq75118 91.5 4e-13
seq72357 91.5 4e-13
seq75306 89.7 1e-12
seq73363 86.0 1e-11
seq50859 84.2 5e-11
>seq65811
Length=66007
Score = 163 bits (180), Expect = 7e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||| ||||| || || || || |||| |||||| || |||||||| || ||||||
Sbjct 54369 AGGACAAGATGGAGTGTTGACTCCTTCTGGATATTGTAGTCAGCCAAAGTCCTTCCATCT 54428
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| | | || ||||| || ||||| || |||||||||
Sbjct 54429 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 54488
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| ||| ||||||| || |||||||| ||| | ||||| || | ||||| |||
Sbjct 54489 TGGATTTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAGGGTGATAGTC 54548
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || ||||| || || | || | ||||||
Sbjct 54549 TTACCGGTCAAGGTCTTCACAAAGATCTGCATT 54581
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || |||||||| ||||| | |||||| |||||||| || | || ||
Sbjct 55024 AGCACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGGCCAAGGTGCGGCCGTCC 55083
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| | || ||| ||||| || ||||| ||||||||||||
Sbjct 55084 TCGAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATGCCTTCCTTGTCT 55143
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || ||| || ||||||||||| ||| | || || || | |||||| |||
Sbjct 55144 TGAATTTTAGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCAACTTCGAGCGTGATGGTC 55203
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | || | ||||||
Sbjct 55204 TTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| || || || ||||| | |||||||| || | ||||| || ||
Sbjct 55252 AGGACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCCGCAAGGGTTCTGCCGTCC 55311
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | ||| ||||| || ||||| || ||||| ||
Sbjct 55312 TCGAGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGAGGAATTCCCTCCTTATCC 55371
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || ||||||||||| ||| | || || || | ||||| |||
Sbjct 55372 TGGATCTTTGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTC 55431
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | |||||
Sbjct 55432 TTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 55463
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || |||||||| || || | ||||| || ||||| || | || |||
Sbjct 54796 AGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCCAAGGTGCGGCCGTCT 54855
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| | | || ||||| || |||||||| |||||||||
Sbjct 54856 TCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCT 54915
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||| || |||||||| ||| | || || || | ||||| ||
Sbjct 54916 TGAATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTT 54975
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | || | ||||||
Sbjct 54976 TTTCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007
>seq72241
Length=55963
Score = 161 bits (178), Expect = 2e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||||| || || |||| ||||||||| |||| ||| | |||||||
Sbjct 39735 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGAGTACGCCCATCT 39794
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||| ||||| | || || || || ||||| || || |||||
Sbjct 39795 TCAAGCTGCTTTCCAGCGAATATAAGCCTCTGCTGATCCGGGGGAATTCCCTCTTTGTCC 39854
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| || ||||| ||||| | || || |||||||| ||||||
Sbjct 39855 TGAATCTTGGTCTTCACATTATCTATGGTATCTGAACTCTCAACCTCTAACGTAATCGTC 39914
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || ||||| || ||
Sbjct 39915 TTCCCAGTCAATGTCTT 39931
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| |||| |||||| || || || || || || || | ||||||||| || | |||
Sbjct 40182 CGAAGCCTCAAGACAAGATGTAGGGTTGACTCCTTCTGAATATTGTAATCCGCAAGGGTT 40241
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| || ||||| ||||||||||| ||||| || || || || || || || ||||| |||
Sbjct 40242 CTACCGTCTTCCAGCTGCTTCCCGGCGAAAATTAGGCGCTGCTGATCAGGAGGAATTCCT 40301
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||| ||||| |||||| ||| || || || || || || ||||||| || |
Sbjct 40302 TCCTTATCTTGAATCTTTGCCTTAACGTTGTCAATAGTATCAGAACTTTCCACCTCAAGA 40361
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || | |||||| | || | ||||||
Sbjct 40362 GTGATGGTTTTGCCTGTTAGAGTTTTGACAAAAATTTGCAT 40402
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || |||| ||| || || ||||| ||||| ||||||| |||||||||||| | |||
Sbjct 40409 ACGGAGCCTCAAGACGAGATGAAGAGTAGATTCCTTTTGGATATTGTAATCGGCGAGAGT 40468
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || || || | ||||||||| ||||||||||| | || || || || ||||| ||
Sbjct 40469 CCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCC 40528
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || || ||||| ||| || || || || || || | || || || |
Sbjct 40529 CTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCAACTTCAAG 40588
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| ||||||||||| |||| ||||||
Sbjct 40589 AGTAATCGTCTTGCCGGTCAGAGTTTT 40615
Score = 129 bits (142), Expect = 1e-24
Identities = 163/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| ||||| |||||||| |||||||| || || || |||| ||| |||||||| | |||
Sbjct 40638 CGGAGTCTGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCGAGGGTT 40697
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || || || || || |||||||| || || || || ||||| || || ||
Sbjct 40698 CGGCCGTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAGGGATTCCC 40757
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||| ||||| ||| ||| ||||| || || ||| | || || || |
Sbjct 40758 TCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTATCGGAGCTCTCGACCTCAAGG 40817
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || ||||| || || | ||||| | ||| | ||||| ||
Sbjct 40818 GTAATTGTCTTACCGGTTAGGGTTTTCACGAAGATCTGCATCTT 40861
>seq42370
Length=41228
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| |||||||| || || | ||||||||| |||||||| | |||||
Sbjct 10873 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTACGTCCATCC 10814
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||||||||||||||| || | || || || || ||||| || ||||| ||
Sbjct 10813 TCGAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTATCC 10754
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| || ||||| |||||| | || || || | || || ||
Sbjct 10753 TGGATCTTGGCCTTCACATTATCTATGGTATCTGAGCTCTCAACCTCCAGAGTAATAGTT 10694
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || ||||| || ||
Sbjct 10693 TTCCCTGTCAATGTCTT 10677
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| |||| ||| || || || || || |||||||| | |||||||||||| | |||
Sbjct 10198 CGAAGCCTCAAGACGAGATGAAGGGTCGACTCTTTTTGAATATTGTAATCGGCAAGAGTC 10139
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || | ||||||||||| ||||| || | ||| ||||| || || || |||
Sbjct 10138 CGGCCATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGAGGGATCCCT 10079
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||| || || || || ||| || || || ||||| || | || || || |
Sbjct 10078 TCCTTATCCTGAATTTTAGCCTTGACGTTGTCAATAGTGTCGGAACTCTCAACCTCGAGA 10019
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| |||||||| || || | |||||
Sbjct 10018 GTAATCGTCTTTCCGGTTAGGGTTTT 9993
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| || || || ||||| || || | || |||||||| | |||| || ||
Sbjct 9961 AGAACAAGATGAAGGGTTGATTCCTTCTGTATGTTATAATCGGCTAGGGTTCGGCCGTCC 9902
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | || || || ||||||||||| || || || || || || ||||| ||||| |||
Sbjct 9901 TCCAATTGTTTGCCGGCGAAGATAAGGCGCTGCTGATCCGGAGGGATACCCTCCTTATCT 9842
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| || || || || || | || || || | || || |||
Sbjct 9841 TGGATCTTAGCCTTGACATTATCAATAGTATCGGAACTCTCAACCTCGAGAGTTATGGTC 9782
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || | ||||| | ||| | ||||||
Sbjct 9781 TTGCCTGTTAGGGTTTTCACGAAGATCTGCATT 9749
>seq73807
Length=69832
Score = 138 bits (152), Expect = 3e-27
Identities = 166/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || ||||| || || |||| ||| || || || | ||
Sbjct 38705 ACGAAGACGAAGAACCAAGTGCAGGGTGGACTCCTTCTGGATATTATAGTCCGCAAGGGT 38764
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| ||||| || |||||||| ||||| |||||||| | ||||| || || ||||| ||
Sbjct 38765 CCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGAGGAATTCC 38824
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||||||||| || || |||||| |||||| || || || |||||| | ||||| || |
Sbjct 38825 TTCCTTGTCCTGAAT-TTTTGCTTTCACATTATCAATAGTATCTGAGCTCTCCACCTCCA 38883
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
| ||||| ||||| || || | || || | ||| | ||||||
Sbjct 38884 AAGTGATTGTCTTCCCTGTAAGTGTCTTCACGAAAATTTGCAT 38926
Score = 138 bits (152), Expect = 3e-27
Identities = 166/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| |||||| ||||| ||||| || ||||| | ||||| || || | ||
Sbjct 39617 ACGAAGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCAAGGGT 39676
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || || || ||||| ||||| || | || ||| ||||| || ||||| ||
Sbjct 39677 ACGGCCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGAATTCC 39736
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|||||||| ||||| ||| || || ||| || || ||||||||| |||| || || |
Sbjct 39737 CTCCTTGTCCTGGAT-TTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACTTCAA 39795
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || |||| || || | || | ||||||
Sbjct 39796 GGGTGATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCAT 39838
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| |||| |||||| ||||| ||||| || ||||| | || ||||| || | ||
Sbjct 39846 CGAAGCCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTATAATCTGCAAGGGTA 39905
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || || || || ||||| ||||| | || || || || || ||||| |||
Sbjct 39906 CGACCATCCTCCAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGGGGAATTCCT 39965
Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| || |||||| || ||| || || ||||| || | || || || |
Sbjct 39966 TCCTTGTCTTGAAT-TTTTGCTTTGACATTATCAATAGTGTCAGAACTCTCTACTTCGAG 40024
Query 225672 CGTGATCGTCTTGCCCGT 225689
|| || |||||||| ||
Sbjct 40025 AGTTATTGTCTTGCCAGT 40042
>seq71687
Length=64904
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| |||||||| || || || || || ||
Sbjct 44701 AGGACCAGGTGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGCTAAGGTCCTGCCTTCC 44760
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || || || || || || |||||||| |||
Sbjct 44761 TCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGTGGGATGCCTTCCTTATCT 44820
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| || ||||| || |||| ||| || || | || || |||
Sbjct 44821 TGGATCTTCGCCTTCACATTGTCAATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTC 44880
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||||| ||||| | ||| | ||||| ||
Sbjct 44881 TTACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 44915
>seq25273
Length=6599
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 225507 AAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAG 225566
|||||| ||||||||||| || |||| |||||| || | | ||||| | ||||| ||
Sbjct 392 AAGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCAGGTAGTGTTCTGCTGTCTTCGAG 333
Query 225567 CTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGAT 225626
||||||||| | |||||| || ||||| ||||| || || || || ||||| || || ||
Sbjct 332 CTGCTTCCCGGAGAAGATGAGACGTTGCTGGTCCGGTGGGATGCCCTCCTTCTCCTGAAT 273
Query 225627 CTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC 225686
|| ||| ||| || ||||| || ||| ||| || || | ||||| ||||| ||
Sbjct 272 TTTGGCCTTGACATTGTCAATGGTATCGAAGGATTCGACCTCAAGGGTGATGGTCTTCCC 213
Query 225687 CGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||| | ||||| | ||| | ||||||||
Sbjct 212 CGTGAGGGTTTTCACGAAGATCTGCATTTT 183
>seq75777
Length=26127
Score = 104 bits (114), Expect = 6e-17
Identities = 107/139 (77%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || |||| ||||||| || | |||||| |||||||||||||||||| || ||||||
Sbjct 11885 TATGTCAAGGGCTGGTAAGGTTTTGTGCGTTGTATCAAATTAAACCACATGCTTCACCGC 11826
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | || | |||||| || ||||||||||| |||||| |||| | |||| |
Sbjct 11825 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTTGGTCTTGCGACCGTACTCTCCAGGCAG 11766
Query 7844 AATATTT-ACGCGTTAGCT 7861
| | ||| ||||||||||
Sbjct 11765 AGTGTTTCGCGCGTTAGCT 11747
>seq61105
Length=1314
Score = 102 bits (112), Expect = 2e-16
Identities = 65/71 (92%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||
Sbjct 803 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTAGTAACACGATGTATA 744
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 743 GAGTCTGACAC 733
>seq65714
Length=5499
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || |||| ||||||||||||| ||||||||||| | |
Sbjct 1098 TGGTAAGGTTCTTCGCTTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCTGGGCC 1157
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | |||||| || ||| || || |
Sbjct 1158 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCTCAGGCGGGATACTTAACAC 1217
Query 7855 GTTAGCT 7861
|||||||
Sbjct 1218 GTTAGCT 1224
>seq29328
Length=6526
Score = 98.7 bits (108), Expect = 2e-15
Identities = 106/139 (76%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || |||| ||||||| || | ||||| ||||||||||||| | || |||||||||
Sbjct 555 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCAAATTAAACTATATGCTCCACCGC 496
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| |||| | |||||| || |||||||||| |||||| ||| | | |||| ||
Sbjct 495 TTGTACAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACTGTACTCCCCAGGCGG 436
Query 7844 AATATTT-ACGCGTTAGCT 7861
| | ||| |||| ||||||
Sbjct 435 AGTGTTTCACGCATTAGCT 417
>seq73880
Length=17426
Score = 96.9 bits (106), Expect = 8e-15
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| ||||||||||||||| ||||||| |||| ||||||||||
Sbjct 16949 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTTTGCTAAGTGGTAACACGATGTATA 16890
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 16889 GAGTCTGACAC 16879
>seq29494
Length=886
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/127 (77%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7738 GTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTCC 7797
||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | |
Sbjct 232 GTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCY 291
Query 7798 GTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGCGT 7856
|||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||||
Sbjct 292 GTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGCGT 351
Query 7857 TAGCTTA 7863
|||||||
Sbjct 352 TAGCTTA 358
>seq70788
Length=4638
Score = 95.1 bits (104), Expect = 3e-14
Identities = 103/133 (77%), Gaps = 3/133 (2%)
Strand=Plus/Minus
Query 7731 AGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACA 7790
|||| ||||||| || | || || |||| ||||||||||||| |||||||||| | ||
Sbjct 849 AGGGCTGGTAAGGTTTTGCGCATTGTATCGAATTAAACCACATGTTCCACCGCTTGTGCA 790
Query 7791 ATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTC-AGGTGGAAT-AT 7848
|| |||||| || |||||||||| |||||| ||||| | ||| ||||||| | |
Sbjct 789 GGCTCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGATCGTACT-CTCTAGGTGGAGTGTT 731
Query 7849 TTACGCGTTAGCT 7861
|||||| ||| ||
Sbjct 730 TTACGCATTAACT 718
>seq67014
Length=19569
Score = 95.1 bits (104), Expect = 3e-14
Identities = 98/127 (77%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 969 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 910
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || | |||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 909 CCGTCAATTACCTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 850
Query 7855 GTTAGCT 7861
|||||||
Sbjct 849 GTTAGCT 843
>seq73986
Length=64159
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| |||| || | ||| || || |||||||| |||| ||| || || |||||||| |
Sbjct 17046 AAGCCTCAAAACCAAGTGAAGTGTTGATTCTTTCTGGATATTATAGTCAGCCAAAGTACG 17105
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| | ||||| ||||| || || |||| || || ||||| |||||||||||
Sbjct 17106 GCCATCTTCCAATTGCTTACCAGCAAAAATCAGTCTCTGCTGATCGGGAGGAATACCTTC 17165
Query 225615 CTTGTCTTG 225623
|| || ||
Sbjct 17166 TTTATCCTG 17174
>seq65514
Length=43848
Score = 93.3 bits (102), Expect = 1e-13
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||| || |||| ||||||| |||| ||||||||||
Sbjct 7858 AGGGGGTAGCGACTGTTTATTAAAAACATAGAACTCTGCTAAGTGGTAACACGATGTATA 7917
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 7918 GAGTCTGACAC 7928
>seq75118
Length=107863
Score = 91.5 bits (100), Expect = 4e-13
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||||||||||||||||||||| || || ||||| ||||| ||||| || |||||||| ||
Sbjct 42057 GAATATTTGACCATCAGTAATGGAAATTACATTAGTAGGAATATAGGCCGAAACATCTCC 41998
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGT 4559
| ||| ||||| || | |||||||| ||
Sbjct 41997 CGATTGAGTTTCAACTATTGGTAAGGCGGT 41968
>seq72357
Length=64124
Score = 91.5 bits (100), Expect = 4e-13
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||||||||||||||||||||| || || ||||| ||||| |||||||| |||||||| ||
Sbjct 2994 GAATATTTGACCATCAGTAATGGAAATTACATTAGTAGGAATATAAGCCGAAACATCTCC 3053
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGT 4559
| ||| ||||| || | |||| ||| ||
Sbjct 3054 CGATTGAGTTTCAACTATGGGTAGGGCAGT 3083
>seq75306
Length=2310
Score = 89.7 bits (98), Expect = 1e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||||||||||||||||||| || || ||||| ||||| |||||||| |||||||| ||
Sbjct 2067 AATATTTGACCATCAGTAATGGAAATTACATTAGTAGGAATATAAGCCGAAACATCTCCC 2008
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGT 4559
| ||| ||||| | | |||||||| ||
Sbjct 2007 GATTGAGTTTCAAATATTGGTAAGGCGGT 1979
>seq73363
Length=24372
Score = 86.0 bits (94), Expect = 1e-11
Identities = 96/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
|||||| |||||||| || ||| |||||| |||||| ||||||||||| | | | |
Sbjct 15378 TGGTAACGTTCTTTGCTTTGCATCGAATTAAGCCACATGCTCCACCGCTTGTGCGGGCCT 15319
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | ||| || |||| | | |||| | ||| || ||||
Sbjct 15318 CCGTCAATTCCTTTGAGTTTCATTCTTACGAACGTACTCCCCAGGCAGGATACTTAACGC 15259
Query 7855 GTTAGCT 7861
|||| ||
Sbjct 15258 GTTAACT 15252
>seq50859
Length=2997
Score = 84.2 bits (92), Expect = 5e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| ||||||| ||| |||| |||||||||||||||| ||||||| |||| | ||||||||
Sbjct 420 AGGGGGTAGCAACTATTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGATGTATA 361
Query 372697 GGGTCTGACAC 372707
| |||||| ||
Sbjct 360 GAGTCTGATAC 350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1191319520475588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |