Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq65811 163 7e-35 seq72241 161 2e-34 seq42370 152 1e-31 seq73807 138 3e-27 seq71687 131 4e-25 seq25273 131 4e-25 seq75777 104 6e-17 seq61105 102 2e-16 seq65714 100 7e-16 seq29328 98.7 2e-15 seq73880 96.9 8e-15 seq29494 96.9 8e-15 seq70788 95.1 3e-14 seq67014 95.1 3e-14 seq73986 93.3 1e-13 seq65514 93.3 1e-13 seq75118 91.5 4e-13 seq72357 91.5 4e-13 seq75306 89.7 1e-12 seq73363 86.0 1e-11 seq50859 84.2 5e-11 >seq65811 Length=66007 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| || || || || |||| |||||| || |||||||| || |||||| Sbjct 54369 AGGACAAGATGGAGTGTTGACTCCTTCTGGATATTGTAGTCAGCCAAAGTCCTTCCATCT 54428 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | | || ||||| || ||||| || ||||||||| Sbjct 54429 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 54488 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| ||| ||||||| || |||||||| ||| | ||||| || | ||||| ||| Sbjct 54489 TGGATTTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAGGGTGATAGTC 54548 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| || || | || | |||||| Sbjct 54549 TTACCGGTCAAGGTCTTCACAAAGATCTGCATT 54581 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || |||||||| ||||| | |||||| |||||||| || | || || Sbjct 55024 AGCACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGGCCAAGGTGCGGCCGTCC 55083 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || ||| ||||| || ||||| |||||||||||| Sbjct 55084 TCGAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATGCCTTCCTTGTCT 55143 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| || ||||||||||| ||| | || || || | |||||| ||| Sbjct 55144 TGAATTTTAGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCAACTTCGAGCGTGATGGTC 55203 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | || | |||||| Sbjct 55204 TTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| || || || ||||| | |||||||| || | ||||| || || Sbjct 55252 AGGACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCCGCAAGGGTTCTGCCGTCC 55311 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | ||| ||||| || ||||| || ||||| || Sbjct 55312 TCGAGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGAGGAATTCCCTCCTTATCC 55371 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||||||||| ||| | || || || | ||||| ||| Sbjct 55372 TGGATCTTTGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTC 55431 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | ||||| Sbjct 55432 TTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 55463 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || |||||||| || || | ||||| || ||||| || | || ||| Sbjct 54796 AGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCCAAGGTGCGGCCGTCT 54855 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | | || ||||| || |||||||| ||||||||| Sbjct 54856 TCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCT 54915 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||| || |||||||| ||| | || || || | ||||| || Sbjct 54916 TGAATCTTGGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTT 54975 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | || | |||||| Sbjct 54976 TTTCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007 >seq72241 Length=55963 Score = 161 bits (178), Expect = 2e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||| || || |||| ||||||||| |||| ||| | ||||||| Sbjct 39735 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGAGTACGCCCATCT 39794 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| | || || || || ||||| || || ||||| Sbjct 39795 TCAAGCTGCTTTCCAGCGAATATAAGCCTCTGCTGATCCGGGGGAATTCCCTCTTTGTCC 39854 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| || ||||| ||||| | || || |||||||| |||||| Sbjct 39855 TGAATCTTGGTCTTCACATTATCTATGGTATCTGAACTCTCAACCTCTAACGTAATCGTC 39914 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 39915 TTCCCAGTCAATGTCTT 39931 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| |||| |||||| || || || || || || || | ||||||||| || | ||| Sbjct 40182 CGAAGCCTCAAGACAAGATGTAGGGTTGACTCCTTCTGAATATTGTAATCCGCAAGGGTT 40241 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || || ||||| ||||||||||| ||||| || || || || || || || ||||| ||| Sbjct 40242 CTACCGTCTTCCAGCTGCTTCCCGGCGAAAATTAGGCGCTGCTGATCAGGAGGAATTCCT 40301 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| ||||| |||||| ||| || || || || || || ||||||| || | Sbjct 40302 TCCTTATCTTGAATCTTTGCCTTAACGTTGTCAATAGTATCAGAACTTTCCACCTCAAGA 40361 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | |||||| | || | |||||| Sbjct 40362 GTGATGGTTTTGCCTGTTAGAGTTTTGACAAAAATTTGCAT 40402 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || |||| ||| || || ||||| ||||| ||||||| |||||||||||| | ||| Sbjct 40409 ACGGAGCCTCAAGACGAGATGAAGAGTAGATTCCTTTTGGATATTGTAATCGGCGAGAGT 40468 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || | ||||||||| ||||||||||| | || || || || ||||| || Sbjct 40469 CCTGCCGTCCTCCAACTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATTCC 40528 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| || || || || || || | || || || | Sbjct 40529 CTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCAACTTCAAG 40588 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || ||||||||||| |||| |||||| Sbjct 40589 AGTAATCGTCTTGCCGGTCAGAGTTTT 40615 Score = 129 bits (142), Expect = 1e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||||| |||||||| |||||||| || || || |||| ||| |||||||| | ||| Sbjct 40638 CGGAGTCTGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCGAGGGTT 40697 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || || || || || |||||||| || || || || ||||| || || || Sbjct 40698 CGGCCGTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAGGGATTCCC 40757 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||| ||||| ||| ||| ||||| || || ||| | || || || | Sbjct 40758 TCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTATCGGAGCTCTCGACCTCAAGG 40817 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || ||||| || || | ||||| | ||| | ||||| || Sbjct 40818 GTAATTGTCTTACCGGTTAGGGTTTTCACGAAGATCTGCATCTT 40861 >seq42370 Length=41228 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| |||||||| || || | ||||||||| |||||||| | ||||| Sbjct 10873 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTACGTCCATCC 10814 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||||||||||||||| || | || || || || ||||| || ||||| || Sbjct 10813 TCGAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTATCC 10754 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || ||||| |||||| | || || || | || || || Sbjct 10753 TGGATCTTGGCCTTCACATTATCTATGGTATCTGAGCTCTCAACCTCCAGAGTAATAGTT 10694 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 10693 TTCCCTGTCAATGTCTT 10677 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| |||| ||| || || || || || |||||||| | |||||||||||| | ||| Sbjct 10198 CGAAGCCTCAAGACGAGATGAAGGGTCGACTCTTTTTGAATATTGTAATCGGCAAGAGTC 10139 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || | ||||||||||| ||||| || | ||| ||||| || || || ||| Sbjct 10138 CGGCCATCCTCCAATTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCCGGAGGGATCCCT 10079 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| || || || || ||| || || || ||||| || | || || || | Sbjct 10078 TCCTTATCCTGAATTTTAGCCTTGACGTTGTCAATAGTGTCGGAACTCTCAACCTCGAGA 10019 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 || |||||||| || || | ||||| Sbjct 10018 GTAATCGTCTTTCCGGTTAGGGTTTT 9993 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || || || ||||| || || | || |||||||| | |||| || || Sbjct 9961 AGAACAAGATGAAGGGTTGATTCCTTCTGTATGTTATAATCGGCTAGGGTTCGGCCGTCC 9902 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || || ||||||||||| || || || || || || ||||| ||||| ||| Sbjct 9901 TCCAATTGTTTGCCGGCGAAGATAAGGCGCTGCTGATCCGGAGGGATACCCTCCTTATCT 9842 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || || || || || | || || || | || || ||| Sbjct 9841 TGGATCTTAGCCTTGACATTATCAATAGTATCGGAACTCTCAACCTCGAGAGTTATGGTC 9782 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||||| | ||| | |||||| Sbjct 9781 TTGCCTGTTAGGGTTTTCACGAAGATCTGCATT 9749 >seq73807 Length=69832 Score = 138 bits (152), Expect = 3e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || ||||| || || |||| ||| || || || | || Sbjct 38705 ACGAAGACGAAGAACCAAGTGCAGGGTGGACTCCTTCTGGATATTATAGTCCGCAAGGGT 38764 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || |||||||| ||||| |||||||| | ||||| || || ||||| || Sbjct 38765 CCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGTTGATCTGGAGGAATTCC 38824 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||| || || |||||| |||||| || || || |||||| | ||||| || | Sbjct 38825 TTCCTTGTCCTGAAT-TTTTGCTTTCACATTATCAATAGTATCTGAGCTCTCCACCTCCA 38883 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | ||||| ||||| || || | || || | ||| | |||||| Sbjct 38884 AAGTGATTGTCTTCCCTGTAAGTGTCTTCACGAAAATTTGCAT 38926 Score = 138 bits (152), Expect = 3e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| |||||| ||||| ||||| || ||||| | ||||| || || | || Sbjct 39617 ACGAAGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCAAGGGT 39676 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || || || ||||| ||||| || | || ||| ||||| || ||||| || Sbjct 39677 ACGGCCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGAATTCC 39736 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||||| ||||| ||| || || ||| || || ||||||||| |||| || || | Sbjct 39737 CTCCTTGTCCTGGAT-TTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACTTCAA 39795 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||| || || | || | |||||| Sbjct 39796 GGGTGATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCAT 39838 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| |||| |||||| ||||| ||||| || ||||| | || ||||| || | || Sbjct 39846 CGAAGCCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTATAATCTGCAAGGGTA 39905 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || || || ||||| ||||| | || || || || || ||||| ||| Sbjct 39906 CGACCATCCTCCAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGGGGAATTCCT 39965 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| || |||||| || ||| || || ||||| || | || || || | Sbjct 39966 TCCTTGTCTTGAAT-TTTTGCTTTGACATTATCAATAGTGTCAGAACTCTCTACTTCGAG 40024 Query 225672 CGTGATCGTCTTGCCCGT 225689 || || |||||||| || Sbjct 40025 AGTTATTGTCTTGCCAGT 40042 >seq71687 Length=64904 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| |||||||| || || || || || || Sbjct 44701 AGGACCAGGTGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGCTAAGGTCCTGCCTTCC 44760 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || || || || || || |||||||| ||| Sbjct 44761 TCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGTGGGATGCCTTCCTTATCT 44820 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || ||||| || |||| ||| || || | || || ||| Sbjct 44821 TGGATCTTCGCCTTCACATTGTCAATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTC 44880 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| ||||| | ||| | ||||| || Sbjct 44881 TTACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 44915 >seq25273 Length=6599 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 225507 AAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAG 225566 |||||| ||||||||||| || |||| |||||| || | | ||||| | ||||| || Sbjct 392 AAGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCAGGTAGTGTTCTGCTGTCTTCGAG 333 Query 225567 CTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGAT 225626 ||||||||| | |||||| || ||||| ||||| || || || || ||||| || || || Sbjct 332 CTGCTTCCCGGAGAAGATGAGACGTTGCTGGTCCGGTGGGATGCCCTCCTTCTCCTGAAT 273 Query 225627 CTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC 225686 || ||| ||| || ||||| || ||| ||| || || | ||||| ||||| || Sbjct 272 TTTGGCCTTGACATTGTCAATGGTATCGAAGGATTCGACCTCAAGGGTGATGGTCTTCCC 213 Query 225687 CGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||| | ||||| | ||| | |||||||| Sbjct 212 CGTGAGGGTTTTCACGAAGATCTGCATTTT 183 >seq75777 Length=26127 Score = 104 bits (114), Expect = 6e-17 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || |||| ||||||| || | |||||| |||||||||||||||||| || |||||| Sbjct 11885 TATGTCAAGGGCTGGTAAGGTTTTGTGCGTTGTATCAAATTAAACCACATGCTTCACCGC 11826 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 || | || | |||||| || ||||||||||| |||||| |||| | |||| | Sbjct 11825 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTTGGTCTTGCGACCGTACTCTCCAGGCAG 11766 Query 7844 AATATTT-ACGCGTTAGCT 7861 | | ||| |||||||||| Sbjct 11765 AGTGTTTCGCGCGTTAGCT 11747 >seq61105 Length=1314 Score = 102 bits (112), Expect = 2e-16 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| Sbjct 803 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTAGTAACACGATGTATA 744 Query 372697 GGGTCTGACAC 372707 | ||||||||| Sbjct 743 GAGTCTGACAC 733 >seq65714 Length=5499 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || |||| ||||||||||||| ||||||||||| | | Sbjct 1098 TGGTAAGGTTCTTCGCTTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCTGGGCC 1157 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | |||||| || ||| || || | Sbjct 1158 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCTCAGGCGGGATACTTAACAC 1217 Query 7855 GTTAGCT 7861 ||||||| Sbjct 1218 GTTAGCT 1224 >seq29328 Length=6526 Score = 98.7 bits (108), Expect = 2e-15 Identities = 106/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || |||| ||||||| || | ||||| ||||||||||||| | || ||||||||| Sbjct 555 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCAAATTAAACTATATGCTCCACCGC 496 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 || |||| | |||||| || |||||||||| |||||| ||| | | |||| || Sbjct 495 TTGTACAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACTGTACTCCCCAGGCGG 436 Query 7844 AATATTT-ACGCGTTAGCT 7861 | | ||| |||| |||||| Sbjct 435 AGTGTTTCACGCATTAGCT 417 >seq73880 Length=17426 Score = 96.9 bits (106), Expect = 8e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||| Sbjct 16949 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTTTGCTAAGTGGTAACACGATGTATA 16890 Query 372697 GGGTCTGACAC 372707 | ||||||||| Sbjct 16889 GAGTCTGACAC 16879 >seq29494 Length=886 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7738 GTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTCC 7797 ||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | | Sbjct 232 GTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCY 291 Query 7798 GTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGCGT 7856 |||| || |||||||||| | |||||| |||| | | |||| || ||| || |||||| Sbjct 292 GTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGCGT 351 Query 7857 TAGCTTA 7863 ||||||| Sbjct 352 TAGCTTA 358 >seq70788 Length=4638 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/133 (77%), Gaps = 3/133 (2%) Strand=Plus/Minus Query 7731 AGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACA 7790 |||| ||||||| || | || || |||| ||||||||||||| |||||||||| | || Sbjct 849 AGGGCTGGTAAGGTTTTGCGCATTGTATCGAATTAAACCACATGTTCCACCGCTTGTGCA 790 Query 7791 ATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTC-AGGTGGAAT-AT 7848 || |||||| || |||||||||| |||||| ||||| | ||| ||||||| | | Sbjct 789 GGCTCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGATCGTACT-CTCTAGGTGGAGTGTT 731 Query 7849 TTACGCGTTAGCT 7861 |||||| ||| || Sbjct 730 TTACGCATTAACT 718 >seq67014 Length=19569 Score = 95.1 bits (104), Expect = 3e-14 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 969 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 910 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || | |||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 909 CCGTCAATTACCTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 850 Query 7855 GTTAGCT 7861 ||||||| Sbjct 849 GTTAGCT 843 >seq73986 Length=64159 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| |||| || | ||| || || |||||||| |||| ||| || || |||||||| | Sbjct 17046 AAGCCTCAAAACCAAGTGAAGTGTTGATTCTTTCTGGATATTATAGTCAGCCAAAGTACG 17105 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| | ||||| ||||| || || |||| || || ||||| ||||||||||| Sbjct 17106 GCCATCTTCCAATTGCTTACCAGCAAAAATCAGTCTCTGCTGATCGGGAGGAATACCTTC 17165 Query 225615 CTTGTCTTG 225623 || || || Sbjct 17166 TTTATCCTG 17174 >seq65514 Length=43848 Score = 93.3 bits (102), Expect = 1e-13 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| |||||||| || |||| ||||||| |||| |||||||||| Sbjct 7858 AGGGGGTAGCGACTGTTTATTAAAAACATAGAACTCTGCTAAGTGGTAACACGATGTATA 7917 Query 372697 GGGTCTGACAC 372707 | ||||||||| Sbjct 7918 GAGTCTGACAC 7928 >seq75118 Length=107863 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||||||||||||||||||||| || || ||||| ||||| ||||| || |||||||| || Sbjct 42057 GAATATTTGACCATCAGTAATGGAAATTACATTAGTAGGAATATAGGCCGAAACATCTCC 41998 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGT 4559 | ||| ||||| || | |||||||| || Sbjct 41997 CGATTGAGTTTCAACTATTGGTAAGGCGGT 41968 >seq72357 Length=64124 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||||||||||||||||||||| || || ||||| ||||| |||||||| |||||||| || Sbjct 2994 GAATATTTGACCATCAGTAATGGAAATTACATTAGTAGGAATATAAGCCGAAACATCTCC 3053 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGT 4559 | ||| ||||| || | |||| ||| || Sbjct 3054 CGATTGAGTTTCAACTATGGGTAGGGCAGT 3083 >seq75306 Length=2310 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||||||||||||||||||| || || ||||| ||||| |||||||| |||||||| || Sbjct 2067 AATATTTGACCATCAGTAATGGAAATTACATTAGTAGGAATATAAGCCGAAACATCTCCC 2008 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGT 4559 | ||| ||||| | | |||||||| || Sbjct 2007 GATTGAGTTTCAAATATTGGTAAGGCGGT 1979 >seq73363 Length=24372 Score = 86.0 bits (94), Expect = 1e-11 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 |||||| |||||||| || ||| |||||| |||||| ||||||||||| | | | | Sbjct 15378 TGGTAACGTTCTTTGCTTTGCATCGAATTAAGCCACATGCTCCACCGCTTGTGCGGGCCT 15319 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | ||| || |||| | | |||| | ||| || |||| Sbjct 15318 CCGTCAATTCCTTTGAGTTTCATTCTTACGAACGTACTCCCCAGGCAGGATACTTAACGC 15259 Query 7855 GTTAGCT 7861 |||| || Sbjct 15258 GTTAACT 15252 >seq50859 Length=2997 Score = 84.2 bits (92), Expect = 5e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || ||||||| ||| |||| |||||||||||||||| ||||||| |||| | |||||||| Sbjct 420 AGGGGGTAGCAACTATTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGATGTATA 361 Query 372697 GGGTCTGACAC 372707 | |||||| || Sbjct 360 GAGTCTGATAC 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191319520475588