Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq65811 178 3e-39
seq73807 176 9e-39
seq53817 158 3e-33
seq42370 147 5e-30
seq64144 136 8e-27
seq72241 132 1e-25
seq71687 132 1e-25
seq67817 131 4e-25
seq25273 127 4e-24
seq55661 123 5e-23
>seq65811
Length=66007
Score = 178 bits (196), Expect = 3e-39
Identities = 156/192 (81%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| |||||||| || ||||| || | ||| ||||| || || || |||||||||
Sbjct 55273 TCCTTTTGAATGTTGTAATCCGCAAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCAAAG 55332
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||| ||||| ||||| |||||||| || ||||||||||| || ||| ||
Sbjct 55333 ATCAGCCTTTGCTGGTCTGGAGGAATTCCCTCCTTATCCTGGATCTTTGCCTTGACGTTA 55392
Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| |||| || |||| ||||||||||||||||| ||||| || || | |||||||||
Sbjct 55393 TCGATGGTGT-CGGAGCTCTCGACTTCGAGAGTGATGGTCTTTCCGGTAAGAGTCTTAAC 55451
Query 283088 GAATATCTGCAT 283099
||| ||||||||
Sbjct 55452 GAAGATCTGCAT 55463
Score = 167 bits (184), Expect = 5e-36
Identities = 176/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || ||||| |||| || | ||| ||| ||||| || |||||||| ||
Sbjct 55008 ACCTCCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCGGC 55067
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| |||||||| ||||| || || || ||||| |||||||| | ||| ||||| ||
Sbjct 55068 CAAGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGG 55127
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
||| || ||||||||||| || || || |||||| | ||||| |||| || |||| || |
Sbjct 55128 AATGCCTTCCTTGTCTTGAATTTTAGCCTTTACGTTGTCGATGGTGT-CGGAGCTCTCAA 55186
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||| ||||| ||||| || ||||| ||||| || || || |||||
Sbjct 55187 CTTCGAGCGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 55235
Score = 158 bits (174), Expect = 3e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| |||| || | ||| ||| || || ||||||||||| ||
Sbjct 54780 ACCACCACGGAGACGAAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGC 54839
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| |||||||| || || || || || |||||||||||||| | || ||||| ||
Sbjct 54840 CAAGGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGG 54899
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|||||||||||||||||| ||||| ||||| ||| | || || |||| || |||| || |
Sbjct 54900 AATACCCTCCTTGTCTTGAATCTTGGCTTTCACGTTGTCAATGGTGT-CGGAGCTCTCAA 54958
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || ||||| || || || || | |||||| || || || |||||
Sbjct 54959 CCTCCAGGGTGATGGTTTTTCCGGTGAGAGTCTTGACAAAGATTTGCAT 55007
Score = 149 bits (164), Expect = 1e-30
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || || ||||| | || || || ||||| |||||||||||
Sbjct 54354 CCACCACGGAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATATTGTAGTCAGCC 54413
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || | ||||| || || || || || ||||||||||| | || ||||| |||
Sbjct 54414 AAAGTCCTTCCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGA 54473
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051
|| ||||||||||||||||| ||||| || || | || || ||||| | |||| || ||
Sbjct 54474 ATTCCCTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATGGTGTCAG-AGCTCTCCAC 54532
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || ||||| |||||||| ||||| ||||| || || |||||||||
Sbjct 54533 CTCCAGGGTGATAGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCATT 54581
>seq73807
Length=69832
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || | || || || | ||| || ||||| || |||||||| |||
Sbjct 39384 CCACCACGGAGTCGCAAAACAAGGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCTGCA 39443
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| || |||||||| ||||| ||||||||||| || ||| |||
Sbjct 39444 AGGGTACGGCCATCCTCAAGCTGTTTCCCAGCAAAAATCAAACGTTGCTGATCAGGGGGA 39503
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || || || ||||| || | || || ||||| || |||||||
Sbjct 39504 ATTCCCTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCGACT 39563
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || |||| ||||||||||| || |||||
Sbjct 39564 TCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACGAAGATTTGCAT 39610
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || | | || || || | ||| || |||||||| |||||||| ||
Sbjct 39156 CCACCACGGAGTCTCAAGACAAGGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCTGCC 39215
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| ||||||||||| ||||| ||||| ||||| ||||| |||
Sbjct 39216 AGGGTACGGCCATCCTCAAGTTGTTTCCCTGCAAAAATCAAGCGTTGCTGGTCTGGGGGA 39275
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || || || ||||| ||| | || || ||||| || ||| |||
Sbjct 39276 ATTCCCTCCTTGTCCTGAATTTTGGCTTTAACGTTGTCAATTGTGTCTGAGCTTTCAACT 39335
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || ||||| || |||| |||||| || || ||||||||
Sbjct 39336 TCAAGGGTAATGGTCTTTCCTGTCAGAGTCTTGACAAAGATCTGCAT 39382
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || | | || ||||| | ||| || ||||| ||||||||||| |||
Sbjct 39612 CCACCACGAAGTCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTGTAGTCTGCA 39671
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| ||||||||||| || || ||||| | ||| ||||| |||
Sbjct 39672 AGGGTACGGCCATCCTCCAGTTGTTTCCCTGCGAAAATCAATCTTTGCTGGTCTGGGGGA 39731
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| ||||| || ||||| || | || || ||||| || ||| |||
Sbjct 39732 ATTCCCTCCTTGTCCTGGATTTTGGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACT 39791
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || |||| |||||||| || || |||||
Sbjct 39792 TCAAGGGTGATGGTCTTTCCTGTCAGGGTCTTAACAAAGATTTGCAT 39838
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || | | || ||||| | ||| || ||||| ||||| || || |||
Sbjct 39840 CCACCCCGAAGCCTCAAGACAAGATGGAGGGTGGACTCCTTTTGTATGTTATAATCTGCA 39899
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || |||||||| |||||||| || ||||||||||| | || || ||| |||
Sbjct 39900 AGGGTACGACCATCCTCCAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCAGGGGGA 39959
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||||||||| || |||||||| || |||| |||||||| ||| || |||
Sbjct 39960 ATTCCTTCCTTGTCTTGAATTTTTGCTTTGACATTATCAATAGTGTCAGAACTCTCTACT 40019
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||| || ||||| || || | |||||||| || ||||||||
Sbjct 40020 TCGAGAGTTATTGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 40066
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||| || |||||||| || | |||||||| || ||||| ||||||||
Sbjct 38964 TCCTTTTGGATGTTATAATCAGCAAGTGTCCTACCATCCTCAAGCTGTTTACCGGCAAAT 39023
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| ||| || |||||| ||||| || || |||||||| ||||| || || ||| ||
Sbjct 39024 ATCAGACGCTGCTGGTCAGGGGGAATGCCTTCTTTGTCTTGAATCTTAGCCTTAACGTTA 39083
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || || || || ||| ||||| || || | ||||| || || | |||||| ||
Sbjct 39084 TCAATCGTATCAGAGCTTTCTACTTCTAGGGTAACGGTCTTCCCAGTAAGAGTCTTGACA 39143
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 39144 AAGATCTGCAT 39154
>seq53817
Length=15024
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| |||||||| || || || | ||| ||| || |||||||||||||||||
Sbjct 3630 CCACCACGGAGGCGAAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCT 3689
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | ||| || || || || || ||||| ||||| | ||| || ||||| ||
Sbjct 3690 AGAGTTCTGCCGTCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 3749
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || || || || || || | || || || ||||| | ||||||
Sbjct 3750 ATGCCCTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATGGTATCCGAGGATTCGACC 3809
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| ||||| | || || ||||| |||||||||||
Sbjct 3810 TCAAGGGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATTTT 3859
>seq42370
Length=41228
Score = 147 bits (162), Expect = 5e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || ||||| | || ||| || || ||||| || || ||
Sbjct 9977 ACCACCACGGAGACGAAGAACAAGATGAAGGGTTGATTCCTTCTGTATGTTATAATCGGC 9918
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| | |||||| ||||| ||||| | || || || || ||
Sbjct 9917 TAGGGTTCGGCCGTCCTCCAATTGTTTGCCGGCGAAGATAAGGCGCTGCTGATCCGGAGG 9858
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||| ||||||||||| || || || |||| ||||| || ||| || ||
Sbjct 9857 GATACCCTCCTTATCTTGGATCTTAGCCTTGACATTATCAATAGTATCGGAACTCTCAAC 9798
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||||||| || ||||| || || | || || ||||| |||||||||
Sbjct 9797 CTCGAGAGTTATGGTCTTGCCTGTTAGGGTTTTCACGAAGATCTGCATT 9749
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | ||| || || |||||||| | ||| || ||||| ||||| || |||||
Sbjct 10661 ACCACCTCTCAGACGCAGCACCAGATGAAGGGTGGACTCCTTTTGAATGTTATAATCAGC 10602
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | |||||| || | || ||||||||||||||||| | || ||||| ||
Sbjct 10601 TAGAGTTCTGCCATCTTCCAACTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGG 10542
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || || |||||||| || || |||| || || || ||| ||| ||
Sbjct 10541 AATCCCTTCCTTATCCTGAATCTTTGCCTTAACATTATCAATTGTATCAGAACTTTCAAC 10482
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || ||||| || | |||||||| || ||||||||
Sbjct 10481 CTCAAGAGTAATGGTTTTACCAGTGAGGGTCTTAACAAAAATCTGCAT 10434
Score = 138 bits (152), Expect = 2e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|||||||| || ||||| || ||||| || ||||||||||| | ||| ||||| ||||||
Sbjct 10168 TCTTTTTGAATATTGTAATCGGCAAGAGTCCGGCCATCCTCCAATTGCTTCCCAGCAAAG 10109
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | ||| ||||| || || || ||||| || || || || || || ||| |
Sbjct 10108 ATGAGCCTTTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGAATTTTAGCCTTGACGTTG 10049
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| |||||||| ||| || || |||||||| |||||||| || || | || |||||
Sbjct 10048 TCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTAACA 9989
Query 283089 AATATCTGCAT 283099
|||||||||||
Sbjct 9988 AATATCTGCAT 9978
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || | | || ||||||| || || || ||||||||||| |||||
Sbjct 10432 CCACCGCGAAGCCTCAAGACGAGATGTAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 10373
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || | |||||||| | || || ||||||||||||| || || || || |||
Sbjct 10372 AAGGTTCTACCATCCTCCAACTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGA 10313
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||| ||||| ||||| || || ||| |||| || || || ||| |||||
Sbjct 10312 ATCCCCTCCTTATCTTGAATCTTCGCCTTAACGTTATCAATTGTATCAGAACTCTCGACC 10253
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | || ||||||||||| |||| ||| ||||| || || |||||
Sbjct 10252 TCCAAGGTAATCGTCTTACCAGTCAGAGTTTTAACAAAGATTTGCAT 10206
Score = 118 bits (130), Expect = 2e-21
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941
|| ||||| || || || | ||| ||| || || || ||||| ||||| | || ||
Sbjct 10879 AGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTACGT 10820
Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001
|||||||| || || ||||| || ||||| | | || || || ||||| ||||||
Sbjct 10819 CCATCCTCGAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGGGGAATCCCCTCC 10760
Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGT 283060
|| || |||||||| || || || |||| || || || || ||| || || || |||||
Sbjct 10759 TTATCCTGGATCTTGGCCTTCACATTATCTATGGTATCTGA-GCTCTCAACCTCCAGAGT 10701
Query 283061 GATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || ||||| ||||| || |||||||||||
Sbjct 10700 AATAGTTTTCCCTGTCAATGTCTTGACAAATATCTGCAT 10662
>seq64144
Length=11632
Score = 136 bits (150), Expect = 8e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| |||||||| || || | | ||| ||| || |||||||||||||||||
Sbjct 9094 CCACCACGGAGGCGAAGAACAAGGTAAAGGGTGGATTCCTTATGGATGTTGTAGTCAGCT 9153
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | || || || ||||| |||||||| |||| | ||| || ||||| ||
Sbjct 9154 AGTGTTCTGCTGTCTTCGAGTTGCTTCCCGGCGAAGAGGAGACGCTGCTGGTCTAGTGGG 9213
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || |||||||| || || || || || | || || || || || | ||| ||
Sbjct 9214 ATGCCGTCCTTGTCCGAAATTTTGGCCTTGACATTGTCAATGGTATCGGAGGATTCAACC 9273
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| |||||||| ||||| ||||| | || || ||||| |||||||||||
Sbjct 9274 TCAAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATTTT 9323
>seq72241
Length=55963
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | ||| || | |||||||| | ||| || ||||| ||||| || |||||
Sbjct 39947 ACCACCCCTCAGACGCAACACCAGATGAAGAGTGGACTCCTTTTGAATGTTATAATCAGC 40006
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || || || | || |||||||||||||||| | |||||| || ||
Sbjct 40007 TAGAGTACGACCGTCTTCCAACTGCTTCCCGGCAAAGATCAGTCTTTGTTGATCCGGAGG 40066
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || || || || || |||||||| || || ||||||| || || ||| ||| ||
Sbjct 40067 AATCCCTTCTTTATCCTGAATCTTTGCCTTGACATTATCGATGGTATCAGAACTTTCAAC 40126
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || ||||| || | ||||| || || ||||||||
Sbjct 40127 CTCAAGAGTAATAGTTTTACCAGTAAGGGTCTTGACAAAAATCTGCAT 40174
Score = 125 bits (138), Expect = 1e-23
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| |||||||| ||||| || || || || | ||| ||||| | || |||||||| ||
Sbjct 40439 TTCCTTTTGGATATTGTAATCGGCGAGAGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAA 40498
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | || || || ||||| |||||||| || || ||||| || || ||| |
Sbjct 40499 GATAAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTATCCTGAATCTTGGCCTTGACGTT 40558
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || || || ||| || ||||| ||||| |||||||| || |||| ||| |||||
Sbjct 40559 GTCAATTGTATCGGAACTCTCAACTTCAAGAGTAATCGTCTTGCCGGTCAGAGTTTTAAC 40618
Query 283088 GAATATCTGCAT 283099
|||||||||||
Sbjct 40619 AAATATCTGCAT 40630
Score = 123 bits (136), Expect = 5e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || | || || ||||| | || || || ||||| || || || ||
Sbjct 40631 ACCACCGCGGAGTCTGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCGGC 40690
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| |||||||| ||||| ||||| | || || || || ||
Sbjct 40691 GAGGGTTCGGCCGTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAGG 40750
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|| |||||||||||||| ||||| || || || | ||||| || | || |||| ||||
Sbjct 40751 GATTCCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATTGTAT-CGGAGCTCTCGA 40809
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
| || || || || |||||||| || | || || ||||| |||||||| ||
Sbjct 40810 CCTCAAGGGTAATTGTCTTACCGGTTAGGGTTTTCACGAAGATCTGCATCTT 40861
Score = 104 bits (114), Expect = 5e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || || ||||| || || || || | ||| || || ||||| ||||| |||||
Sbjct 39720 CCGCCTCGGAGGCGGAGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAATCAGCC 39779
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || ||||| || || || || || || || || | | || || || |||
Sbjct 39780 AGAGTACGCCCATCTTCAAGCTGCTTTCCAGCGAATATAAGCCTCTGCTGATCCGGGGGA 39839
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||| ||||| || ||||| | || || |||| || || || ||| || ||
Sbjct 39840 ATTCCCTCTTTGTCCTGAATCTTGGTCTTCACATTATCTATGGTATCTGAACTCTCAACC 39899
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | || |||||||| || ||||| ||||| || |||||||||||
Sbjct 39900 TCTAACGTAATCGTCTTCCCAGTCAATGTCTTCACAAATATCTGCAT 39946
>seq71687
Length=64904
Score = 132 bits (146), Expect = 1e-25
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||| |||||| ||||| || | || || || ||||||||||| || ||
Sbjct 44686 CCACCGCGCAAGCGAAGGACCAGGTGCAGTGTCGACTCCTTCTGGATGTTGTAATCCGCT 44745
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || | ||| ||||| || || || ||||||||||| | | || || || ||
Sbjct 44746 AAGGTCCTGCCTTCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGTGGG 44805
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| ||||||||||| || || || | || || || || || | ||| ||
Sbjct 44806 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACATTGTCAATGGTATCGGAGGATTCAACC 44865
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
||||| || || ||||||||||||| || || ||||| |||||||| |||
Sbjct 44866 TCGAGGGTAATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTC 44916
>seq67817
Length=4127
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||| |||| |||||||| || || || | ||| ||| || |||||||||||||||||
Sbjct 1387 CCAACACGGAGGCGAAGAACAAGGTGAATGGTGGATTCCTTCTGGATGTTGTAGTCAGCT 1446
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | | || || ||||| |||||||| ||||| | ||| || ||||| ||
Sbjct 1447 AGTGTTCTGTAGTCTTCGAGTTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1506
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || || || || || | || || || | || | ||||||
Sbjct 1507 ATGCCCTCCTTGTCCGAAATTTTGGCCTTGACATTGTCAATGGTATTGGAGGATTCGACC 1566
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| ||||| | || || ||||| |||| ||||||
Sbjct 1567 TCAAGGGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTACATTTT 1616
>seq25273
Length=6599
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||| | |||||||| | || || | ||| ||| || ||||| ||||||||||
Sbjct 412 CCACCATGGAGGCGAAGAATAAGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCAGGT 353
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | || || || || || ||||||| ||||| | |||||| ||||| ||
Sbjct 352 AGTGTTCTGCTGTCTTCGAGCTGCTTCCCGGAGAAGATGAGACGTTGCTGGTCCGGTGGG 293
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||| || || || || || || || | || || || || | | ||||||
Sbjct 292 ATGCCCTCCTTCTCCTGAATTTTGGCCTTGACATTGTCAATGGTATCGAAGGATTCGACC 233
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| ||||| | || || ||||| |||||||||||
Sbjct 232 TCAAGGGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAGATCTGCATTTT 183
>seq55661
Length=20824
Score = 123 bits (136), Expect = 5e-23
Identities = 166/230 (72%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| ||| |||| || || || | ||| ||| || ||||||||||||| |||
Sbjct 2605 CCACCACGGAGGTGAAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTTAGCT 2546
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | | |||| || || || ||| |||| ||||| | ||| || | ||| ||
Sbjct 2545 AGTGTTCTGTCATCTTCGAGCTGCTTCTCGGCGAAGATGAGACGCTGCT-GTCCGGTGGG 2487
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| | ||||||||| || || || || || || | || || || || || | ||||||
Sbjct 2486 ATGCTCTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATGGTATCGGAGGATTCGACC 2427
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | ||||| ||||| ||| | | || || ||||| |||||||||||
Sbjct 2426 TCAAAGGTGATGGTCTTTCCCATGAGGGTTTTCACGAAGATCTGCATTTT 2377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1045675653439508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |